Ligand validation:5S59

GDP: GUANOSINE-5'-DIPHOSPHATE

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5S59_GDP_B_501	85%	27%	0.059	0.972	1.17	1.76	2	7	0	0	100%	1
5S59_GDP_D_501	63%	28%	0.092	0.934	1.17	1.72	3	6	2	0	100%	1
1TVK_GDP_B_1500	100%	34%	0.012	0.999	1.95	0.71	1	1	8	0	100%	1
6MZG_GDP_D_600	99%	28%	0.026	0.997	1.14	1.75	2	6	2	0	100%	1
9GMY_GDP_B_501	98%	57%	0.034	0.992	0.72	0.77	1	-	0	0	100%	1
9YMG_GDP_B_501	97%	71%	0.034	0.99	0.5	0.46	-	-	0	0	100%	1
9GNU_GDP_B_501	97%	60%	0.035	0.991	0.77	0.61	1	-	0	0	100%	1
2CNW_GDP_F_1001	100%	25%	0.014	0.999	1.21	1.86	4	8	0	0	100%	1
5V9L_GDP_B_201	100%	35%	0.013	0.998	0.98	1.53	1	7	0	0	100%	1
6EG8_GDP_L_401	100%	28%	0.013	0.999	1.16	1.75	3	7	3	0	100%	1
3ZY3_GDP_A_1384	100%	28%	0.014	0.998	1.13	1.74	3	8	1	0	100%	1
5V71_GDP_D_201	100%	28%	0.015	0.998	1.02	1.84	2	9	1	0	100%	1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.