Ligand validation:5SVM

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5SVM designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5SVM_NAG_A_401	85%	84%	0.089	0.955	0.25	0.51	-	-	0	0	100%	0.9333
5SVM_NAG_B_402	40%	44%	0.121	0.83	0.77	1.36	1	1	0	0	100%	0.9333
5SVM_NAG_A_402	39%	87%	0.108	0.814	0.23	0.45	-	-	2	0	100%	0.9333
5SVM_NAG_A_403	35%	80%	0.117	0.803	0.36	0.48	-	-	0	0	100%	0.9333
5SVM_NAG_B_403	33%	44%	0.156	0.835	0.62	1.5	-	3	0	0	100%	0.9333
5SVM_NAG_B_404	2%	87%	0.183	0.485	0.21	0.47	-	-	0	0	100%	0.9333
5SVP_NAG_A_401	89%	83%	0.078	0.956	0.27	0.51	-	-	0	0	100%	0.9333
5SVL_NAG_A_402	89%	75%	0.079	0.957	0.24	0.72	-	1	2	0	100%	0.9333
5SVK_NAG_A_402	79%	78%	0.083	0.927	0.15	0.72	-	1	1	0	100%	0.9333
6AH5_NAG_A_402	49%	69%	0.158	0.905	0.38	0.82	-	-	0	0	100%	0.9333
6AH4_NAG_C_403	46%	71%	0.153	0.886	0.48	0.65	-	-	0	0	100%	0.9333
3H0C_NAG_A_794	100%	56%	0.021	0.995	0.61	1.08	-	1	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333
3GXM_NAG_A_498	100%	45%	0.026	0.992	0.75	1.34	-	2	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.