Ligand validation:5VCD

GOL: GLYCEROL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5VCD_GOL_A_604	78%	65%	0.111	0.953	0.43	0.9	-	-	0	0	100%	1
5VCD_GOL_A_613	60%	91%	0.112	0.897	0.38	0.21	-	-	0	0	100%	1
5VCD_GOL_A_607	48%	81%	0.181	0.926	0.42	0.4	-	-	0	0	100%	1
5VCD_GOL_A_610	42%	90%	0.162	0.879	0.35	0.27	-	-	0	0	100%	1
5VCD_GOL_A_609	38%	85%	0.18	0.884	0.36	0.39	-	-	0	0	100%	1
5VCD_GOL_A_603	35%	79%	0.186	0.872	0.44	0.43	-	-	0	0	100%	1
5VCD_GOL_A_606	33%	87%	0.203	0.884	0.37	0.33	-	-	1	0	100%	1
5VCD_GOL_A_602	32%	88%	0.171	0.845	0.36	0.31	-	-	1	0	100%	1
5VCD_GOL_A_605	29%	88%	0.213	0.874	0.19	0.46	-	-	1	0	100%	1
5VCD_GOL_A_608	22%	90%	0.172	0.789	0.35	0.26	-	-	0	0	100%	1
5VCD_GOL_A_611	20%	90%	0.304	0.909	0.35	0.25	-	-	0	0	100%	1
5VCD_GOL_A_612	19%	89%	0.188	0.784	0.38	0.27	-	-	0	0	100%	1
2YOQ_GOL_A_1196	100%	35%	0.024	0.996	0.38	2.12	-	2	0	0	100%	1
4KFD_GOL_D_806	100%	57%	0.024	0.995	0.41	1.21	-	-	0	0	100%	1
4KFE_GOL_E_803	100%	63%	0.024	0.995	0.31	1.07	-	-	0	0	100%	1
1M5Q_GOL_W_4006	100%	0%	0.027	0.992	4.89	6.2	5	3	0	0	100%	1
2Y3G_GOL_A_1150	100%	85%	0.029	0.995	0.36	0.39	-	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.