Ligand validation:5VER

PMP: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE

PMP is a Ligand Of Interest in 5VER designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5VER_PMP_B_501	64%	7%	0.184	0.985	3.37	1.55	3	5	0	0	100%	1
5VEQ_PMP_B_501	83%	7%	0.123	0.981	3.54	1.45	3	3	0	0	100%	1
3E2Y_PMP_B_456	82%	51%	0.112	0.967	0.86	1.02	1	2	4	0	100%	1
3E2Z_PMP_B_456	74%	21%	0.154	0.986	1.5	1.83	3	3	3	0	100%	1
2QB3_PMP_A_700	99%	24%	0.05	0.985	2.08	1.04	4	-	0	0	100%	0.4
8TN3_PMP_B_501	99%	52%	0.058	0.99	0.87	0.99	-	1	0	0	100%	1
8PNX_PMP_A_301	99%	55%	0.053	0.984	0.56	1.16	-	2	0	0	100%	1
6HBV_PMP_A_502	99%	16%	0.061	0.992	2.55	1.19	3	2	0	0	100%	0.5
2QBT_PMP_A_700	99%	49%	0.062	0.99	0.88	1.09	1	1	0	0	100%	0.75

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.