NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 5VK2 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5VK2_NAG_B_509 | 44% | 75% | 0.157 | 0.884 | 0.42 | 0.55 | - | - | 1 | 0 | 100% | 0.9333 |
5VK2_NAG_A_506 | 32% | 87% | 0.219 | 0.895 | 0.31 | 0.39 | - | - | 0 | 0 | 100% | 0.9333 |
5VK2_NAG_C_514 | 31% | 77% | 0.224 | 0.893 | 0.37 | 0.55 | - | - | 0 | 0 | 100% | 0.9333 |
5VK2_NAG_A_512 | 31% | 77% | 0.234 | 0.901 | 0.39 | 0.53 | - | - | 1 | 0 | 100% | 0.9333 |
5VK2_NAG_b_505 | 27% | 80% | 0.211 | 0.857 | 0.33 | 0.51 | - | - | 0 | 0 | 100% | 0.9333 |
5VK2_NAG_c_507 | 19% | 78% | 0.226 | 0.823 | 0.36 | 0.53 | - | - | 0 | 0 | 100% | 0.9333 |
5VK2_NAG_A_511 | 12% | 86% | 0.276 | 0.81 | 0.29 | 0.43 | - | - | 0 | 0 | 100% | 0.9333 |
5VK2_NAG_B_508 | 11% | 87% | 0.278 | 0.799 | 0.31 | 0.39 | - | - | 0 | 0 | 100% | 0.9333 |
5VK2_NAG_a_507 | 9% | 80% | 0.302 | 0.79 | 0.34 | 0.49 | - | - | 0 | 0 | 100% | 0.9333 |
5VK2_NAG_C_506 | 9% | 90% | 0.334 | 0.821 | 0.23 | 0.37 | - | - | 0 | 0 | 100% | 0.9333 |
5VK2_NAG_B_505 | 8% | 88% | 0.276 | 0.748 | 0.31 | 0.35 | - | - | 0 | 0 | 100% | 0.9333 |
6P91_NAG_a_508 | 4% | 84% | 0.387 | 0.76 | 0.33 | 0.43 | - | - | 0 | 0 | 100% | 0.9333 |
3H0C_NAG_A_794 | 100% | 56% | 0.021 | 0.995 | 0.61 | 1.08 | - | 1 | 0 | 0 | 100% | 0.9333 |
5LDS_NAG_B_1007 | 100% | 67% | 0.022 | 0.995 | 0.48 | 0.79 | - | - | 0 | 0 | 100% | 0.9333 |
5O5D_NAG_A_601 | 100% | 65% | 0.022 | 0.994 | 0.32 | 0.99 | - | 1 | 0 | 0 | 100% | 0.9333 |
6MUG_NAG_G_629 | 100% | 76% | 0.022 | 0.994 | 0.35 | 0.58 | - | - | 0 | 0 | 100% | 0.9333 |
3GXM_NAG_A_498 | 100% | 45% | 0.026 | 0.992 | 0.75 | 1.34 | - | 2 | 0 | 0 | 100% | 0.9333 |