GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 5X4B designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5X4B_GDP_B_201 | 100% | 37% | 0.031 | 0.992 | 1.2 | 1.19 | 2 | 3 | 0 | 0 | 100% | 1 |
| 5X4B_GDP_A_201 | 100% | 33% | 0.034 | 0.99 | 1.4 | 1.16 | 4 | 4 | 0 | 0 | 100% | 1 |
| 4DCS_GDP_A_501 | 92% | 25% | 0.065 | 0.961 | 1.15 | 1.79 | 3 | 7 | 0 | 0 | 100% | 1 |
| 4DCU_GDP_A_501 | 92% | 24% | 0.068 | 0.963 | 1.17 | 1.8 | 3 | 7 | 0 | 0 | 100% | 1 |
| 2HJG_GDP_A_500 | 78% | 28% | 0.083 | 0.929 | 1.18 | 1.58 | 4 | 6 | 1 | 0 | 100% | 1 |
| 5MBS_GDP_A_501 | 71% | 23% | 0.092 | 0.915 | 1.25 | 1.78 | 4 | 7 | 0 | 0 | 100% | 0.8 |
| 4DCT_GDP_A_501 | 68% | 25% | 0.102 | 0.913 | 1.14 | 1.77 | 2 | 7 | 2 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 32% | 0.012 | 0.999 | 1.95 | 0.71 | 1 | 1 | 8 | 0 | 100% | 1 |
| 2CNW_GDP_A_1001 | 100% | 24% | 0.014 | 0.998 | 1.16 | 1.84 | 3 | 9 | 0 | 0 | 100% | 1 |
| 3ZY3_GDP_A_1384 | 100% | 26% | 0.014 | 0.998 | 1.13 | 1.74 | 3 | 8 | 1 | 0 | 100% | 1 |
| 5V9L_GDP_A_201 | 100% | 35% | 0.014 | 0.998 | 1.01 | 1.42 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6EG8_GDP_K_401 | 100% | 25% | 0.015 | 0.999 | 1.16 | 1.76 | 3 | 7 | 0 | 0 | 100% | 1 |
