5Y5S
CDL: CARDIOLIPIN
CDL is a Ligand Of Interest in 5Y5S designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5Y5S_CDL_M_415 | 41% | 34% | 0.128 | 0.953 | 1.32 | 1.27 | 3 | 3 | 1 | 0 | 39% | 1 |
| 5Y5S_CDL_H_304 | 16% | 43% | 0.306 | 0.918 | 1.04 | 1.15 | 4 | 8 | 4 | 0 | 79% | 1 |
| 5Y5S_CDL_Y_103 | 11% | 76% | 0.17 | 0.844 | 0.47 | 0.49 | - | - | 0 | 0 | 13% | 1 |
| 5Y5S_CDL_H_302 | 11% | 38% | 0.288 | 0.87 | 1.08 | 1.33 | 4 | 9 | 5 | 0 | 64% | 1 |
| 5Y5S_CDL_K_103 | 10% | 44% | 0.306 | 0.837 | 1 | 1.17 | 4 | 9 | 5 | 0 | 86% | 1 |
| 5Y5S_CDL_S_103 | 6% | 38% | 0.228 | 0.733 | 1.1 | 1.31 | 4 | 8 | 12 | 0 | 62% | 1 |
| 5Y5S_CDL_Q_104 | 6% | 43% | 0.25 | 0.727 | 1.09 | 1.13 | 4 | 7 | 5 | 0 | 75% | 1 |
| 5Y5S_CDL_D_103 | 5% | 28% | 0.245 | 0.746 | 1.45 | 1.43 | 4 | 6 | 3 | 0 | 40% | 1 |
| 5Y5S_CDL_Y_102 | 3% | 30% | 0.25 | 0.693 | 1.48 | 1.33 | 4 | 4 | 1 | 0 | 40% | 1 |
| 7C52_CDL_M_412 | 16% | 33% | 0.212 | 0.895 | 1.31 | 1.34 | 3 | 5 | 2 | 0 | 39% | 1 |
| 9GCX_CDL_C_504 | 62% | 68% | 0.143 | 0.934 | 0.43 | 0.79 | - | 2 | 16 | 0 | 100% | 1 |
| 2GNU_CDL_M_1309 | 38% | 22% | 0.122 | 0.984 | 1.77 | 1.5 | 3 | 3 | 0 | 0 | 10% | 1 |
| 3ZDQ_CDL_A_1721 | 37% | 64% | 0.215 | 0.943 | 0.72 | 0.65 | 4 | 4 | 28 | 1 | 84% | 0.5 |
| 6JY3_CDL_B_301 | 33% | 24% | 0.163 | 0.908 | 1.53 | 1.57 | 5 | 14 | 0 | 0 | 64% | 1 |
| 7COH_CDL_A_521 | 33% | 72% | 0.212 | 0.901 | 0.46 | 0.6 | - | 2 | 12 | 0 | 94% | 1 |
