PGV: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
PGV is a Ligand Of Interest in 5Z84 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5Z84_PGV_P_303 | 78% | 44% | 0.135 | 0.986 | 0.8 | 1.25 | 1 | 8 | 4 | 0 | 100% | 1 |
| 5Z84_PGV_N_609 | 78% | 35% | 0.127 | 0.976 | 1.13 | 1.32 | 5 | 5 | 2 | 0 | 100% | 1 |
| 5Z84_PGV_C_305 | 77% | 36% | 0.132 | 0.979 | 1.06 | 1.36 | 1 | 7 | 3 | 0 | 100% | 1 |
| 5Z84_PGV_A_609 | 75% | 39% | 0.14 | 0.979 | 1.11 | 1.19 | 5 | 5 | 6 | 0 | 100% | 1 |
| 5Z84_PGV_C_309 | 16% | 26% | 0.202 | 0.779 | 1.41 | 1.48 | 3 | 8 | 12 | 0 | 100% | 1 |
| 5Z84_PGV_A_610 | 16% | 23% | 0.259 | 0.839 | 1.42 | 1.63 | 4 | 8 | 9 | 0 | 100% | 1 |
| 5Z84_PGV_G_103 | 12% | 25% | 0.253 | 0.79 | 1.25 | 1.69 | 2 | 6 | 7 | 0 | 100% | 1 |
| 5Z84_PGV_Z_101 | 9% | 34% | 0.308 | 0.821 | 1.15 | 1.36 | 2 | 7 | 19 | 0 | 100% | 1 |
| 9IKG_PGV_A_614 | 94% | 50% | 0.073 | 0.982 | 0.74 | 1.06 | 2 | 2 | 0 | 0 | 100% | 1 |
| 5B1B_PGV_C_302 | 93% | 53% | 0.078 | 0.979 | 0.81 | 0.87 | 1 | 1 | 3 | 0 | 100% | 1 |
| 7YPY_PGV_P_302 | 92% | 51% | 0.079 | 0.978 | 0.79 | 0.99 | 2 | 2 | 1 | 0 | 100% | 1 |
| 9IKH_PGV_C_303 | 92% | 50% | 0.08 | 0.979 | 0.77 | 1.06 | - | 3 | 1 | 0 | 100% | 1 |
| 9KUM_PGV_P_304 | 92% | 47% | 0.08 | 0.978 | 0.92 | 1.01 | 4 | 4 | 1 | 0 | 100% | 1 |
| 9IKF_PGV_P_304 | 91% | 51% | 0.084 | 0.979 | 0.87 | 0.92 | 2 | 3 | 0 | 0 | 100% | 1 |
