Ligand validation:5VRP

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5VRP designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5VRP_NAG_A_501	6%	64%	0.152	0.585	0.25	1.1	-	1	1	0	93%	0.9333
5VRP_NAG_B_501	1%	19%	0.174	0.324	0.94	2.47	1	1	0	0	100%	0.9333
7XGK_NAG_A_401	73%	15%	0.09	0.915	1.09	2.68	1	7	0	0	100%	0.9333
7XGO_NAG_A_401	69%	17%	0.094	0.906	0.98	2.59	-	8	0	0	100%	0.9333
2G1S_NAG_A_985	64%	63%	0.102	0.9	0.6	0.8	-	1	0	0	100%	0.9333
4GJ6_NAG_A_1000	64%	76%	0.136	0.935	0.36	0.58	-	-	0	0	100%	0.9333
4GJA_NAG_A_1000	61%	63%	0.128	0.915	0.33	1.08	-	2	0	0	100%	0.9333
3H0C_NAG_A_794	100%	56%	0.021	0.995	0.61	1.08	-	1	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333
3PPS_NAG_B_760	100%	44%	0.028	0.993	0.57	1.57	-	3	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.