UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 6KVL designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 6KVL_UDP_A_501 | 96% | 9% | 0.055 | 0.969 | 2.02 | 2.37 | 7 | 9 | 0 | 0 | 100% | 1 |
| 6INF_UDP_A_501 | 100% | 32% | 0.028 | 0.993 | 1.23 | 1.39 | 3 | 7 | 0 | 0 | 100% | 1 |
| 6INI_UDP_A_501 | 99% | 30% | 0.044 | 0.983 | 1.3 | 1.41 | 4 | 5 | 0 | 0 | 100% | 1 |
| 6INH_UDP_A_501 | 98% | 31% | 0.048 | 0.979 | 1.19 | 1.46 | 3 | 6 | 0 | 0 | 100% | 1 |
| 6O88_UDP_A_500 | 97% | 28% | 0.049 | 0.975 | 0.95 | 1.83 | - | 7 | 0 | 0 | 100% | 1 |
| 6O86_UDP_A_500 | 97% | 34% | 0.052 | 0.974 | 1.03 | 1.48 | 1 | 6 | 0 | 0 | 100% | 1 |
| 5F87_UDP_A_501 | 100% | 29% | 0.013 | 0.999 | 1.18 | 1.54 | 2 | 4 | 2 | 0 | 100% | 1 |
| 5V0T_UDP_B_501 | 100% | 69% | 0.014 | 0.999 | 0.43 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 7FGA_UDP_D_401 | 100% | 2% | 0.014 | 0.999 | 3.6 | 2.79 | 15 | 12 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.5 | 2.77 | 14 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_C_401 | 100% | 3% | 0.013 | 0.999 | 3.48 | 2.73 | 14 | 11 | 0 | 0 | 100% | 1 |