NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
NDP is a Ligand Of Interest in 6PAY designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
6PAY_NDP_A_503 | 70% | 11% | 0.118 | 0.964 | 2.55 | 1.71 | 6 | 10 | 0 | 0 | 83% | 0.8333 |
6IO0_NDP_B_507 | 97% | 54% | 0.072 | 0.986 | 0.77 | 0.99 | 1 | 5 | 2 | 0 | 100% | 1 |
5TQH_NDP_B_503 | 89% | 34% | 0.103 | 0.981 | 1.24 | 1.35 | 5 | 3 | 2 | 0 | 100% | 1 |
6B0Z_NDP_B_501 | 84% | 36% | 0.119 | 0.983 | 1.32 | 1.19 | 3 | 3 | 4 | 0 | 100% | 1 |
3INM_NDP_B_501 | 83% | 35% | 0.111 | 0.971 | 1.53 | 1.06 | 4 | 1 | 4 | 0 | 100% | 1 |
8HB9_NDP_AAA_502 | 82% | 66% | 0.12 | 0.976 | 0.62 | 0.7 | - | 1 | 0 | 0 | 100% | 1 |
1US0_NDP_A_318 | 100% | 45% | 0.027 | 0.998 | 1.21 | 0.91 | 3 | - | 4 | 0 | 100% | 1 |
2I16_NDP_A_319 | 100% | 46% | 0.028 | 0.998 | 1.2 | 0.9 | 3 | 1 | 0 | 0 | 100% | 1 |
2I17_NDP_A_319 | 100% | 46% | 0.029 | 0.998 | 1.22 | 0.89 | 3 | - | 0 | 0 | 100% | 1 |
2PF8_NDP_A_318 | 100% | 46% | 0.031 | 0.998 | 1.17 | 0.93 | 3 | - | 4 | 0 | 100% | 1 |
2PFH_NDP_A_318 | 100% | 26% | 0.03 | 0.998 | 1.79 | 1.2 | 8 | 7 | 4 | 0 | 100% | 1 |