6PDL | pdb_00006pdl


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 6PDL designated by the RCSB
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
6PDL_NAG_C_701 21% 61% 0.251 0.8720.68 0.66 1 100100%1
6PDL_NAG_A_701 18% 64% 0.298 0.8970.57 0.67 - 100100%1
6PDL_NAG_D_201 13% 60% 0.271 0.8270.61 0.79 - 110100%1
6PDL_NAG_B_201 8% 55% 0.311 0.8050.74 0.85 1 110100%1
6PDL_NAG_E_701 8% 64% 0.324 0.8110.45 0.78 - -10100%1
6PDL_NAG_C_702 6% 65% 0.336 0.7830.47 0.73 - 100100%1
6PDL_NAG_H_201 4% 56% 0.426 0.8250.66 0.89 - 110100%1
6PDL_NAG_A_702 3% 58% 0.379 0.760.77 0.7 1 -00100%1
6PDL_NAG_H_202 3% 46% 0.43 0.7811.27 0.73 2 -30100%1
6PDL_NAG_E_702 2% 59% 0.342 0.6680.56 0.85 - 100100%1
6PDL_NAG_G_701 2% 62% 0.399 0.7230.75 0.56 1 -00100%1
6PDL_NAG_G_702 1% 62% 0.39 0.6450.72 0.61 1 -00100%1
6PDL_NAG_F_201 1% 54% 0.434 0.6910.58 1.03 - 100100%1
2X9M_NAG_A_1605 67% 57% 0.138 0.9490.55 0.96 - 100100%1
6PD4_NAG_A_705 39% 70% 0.113 0.8150.31 0.7 - 100100%1
8JR5_NAG_A_702 34% 61% 0.105 0.7870.74 0.6 1 -00100%1
8VF1_NAG_A_702 29% 67% 0.1 0.7570.36 0.73 - 100100%1
7SYY_NAG_A_701 8% 87% 0.319 0.8150.17 0.45 - -00100%1
5LDS_NAG_C_1003 100% 65% 0.016 0.9970.55 0.64 - -30100%1
3H0C_NAG_A_796 100% 55% 0.02 0.9950.47 1.12 - 100100%1
5O5D_NAG_B_501 100% 60% 0.02 0.9950.38 0.97 - 100100%1
9OAR_NAG_C_202 100% 52% 0.021 0.9940.68 1.06 - 100100%1
6MUG_NAG_G_629 100% 72% 0.022 0.9940.35 0.58 - -00100%1