UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 7E9J designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
7E9J_UDP_A_603 | 84% | 70% | 0.118 | 0.981 | 0.45 | 0.71 | - | 1 | 0 | 0 | 100% | 1 |
7E9J_UDP_B_603 | 78% | 72% | 0.108 | 0.95 | 0.37 | 0.71 | - | 2 | 0 | 0 | 100% | 1 |
7E9L_UDP_A_603 | 86% | 65% | 0.101 | 0.969 | 0.65 | 0.7 | - | 1 | 0 | 0 | 100% | 1 |
6XFI_UDP_A_601 | 85% | 69% | 0.099 | 0.965 | 0.46 | 0.73 | - | 2 | 0 | 0 | 100% | 1 |
7E9K_UDP_D_603 | 78% | 86% | 0.126 | 0.969 | 0.22 | 0.5 | - | 1 | 0 | 0 | 100% | 1 |
8KB7_UDP_A_601 | 60% | 30% | 0.181 | 0.969 | 1.26 | 1.52 | 4 | 7 | 0 | 0 | 100% | 1 |
8X3Q_UDP_C_401 | 100% | 3% | 0.015 | 0.998 | 3.32 | 2.69 | 13 | 13 | 0 | 0 | 100% | 1 |
8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
8VH8_UDP_C_704 | 100% | 62% | 0.032 | 0.995 | 0.55 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
4GYW_UDP_C_1101 | 100% | 37% | 0.037 | 0.988 | 1.03 | 1.45 | 2 | 4 | 0 | 0 | 100% | 1 |
2IV7_UDP_A_1372 | 100% | 40% | 0.035 | 0.984 | 0.85 | 1.49 | - | 4 | 0 | 0 | 100% | 1 |