XYP: beta-D-xylopyranose
XYP is a Ligand Of Interest in 7PLB designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
7PLB_XYP_A_303 | 76% | 56% | 0.085 | 0.92 | 0.61 | 1.07 | - | 1 | 0 | 0 | 100% | 1 |
7PLB_XYP_A_305 | 64% | 60% | 0.124 | 0.921 | 0.58 | 0.93 | - | 1 | 0 | 0 | 100% | 1 |
7PLB_XYP_A_304 | 39% | 63% | 0.162 | 0.867 | 0.57 | 0.85 | - | 1 | 0 | 0 | 100% | 1 |
7PLB_XYP_B_304 | 32% | 60% | 0.186 | 0.857 | 0.57 | 0.95 | - | 1 | 0 | 0 | 100% | 1 |
7PLB_XYP_B_302 | 29% | 57% | 0.174 | 0.831 | 0.62 | 1.03 | - | 2 | 0 | 0 | 100% | 1 |
7PLB_XYP_B_305 | 20% | 54% | 0.205 | 0.807 | 0.59 | 1.16 | - | 2 | 0 | 0 | 100% | 1 |
7PLC_XYP_D_302 | 65% | 60% | 0.114 | 0.916 | 0.58 | 0.95 | - | 1 | 0 | 0 | 100% | 1 |
1OD8_XYP_A_1311 | 100% | 64% | 0.047 | 0.992 | 0.75 | 0.64 | - | - | 0 | 0 | 100% | 1 |
1V0M_XYP_A_1304 | 100% | 71% | 0.035 | 0.993 | 0.82 | 0.33 | - | - | 0 | 0 | 90% | 0.9 |
2WYS_XYP_A_1001 | 99% | 38% | 0.052 | 0.983 | 0.69 | 1.7 | - | 4 | 3 | 0 | 100% | 1 |
1V0N_XYP_A_1306 | 98% | 60% | 0.048 | 0.989 | 0.76 | 0.78 | - | - | 0 | 0 | 90% | 0.9 |
1V0L_XYP_A_1305 | 98% | 72% | 0.055 | 0.992 | 0.52 | 0.57 | - | - | 0 | 0 | 90% | 0.9 |