8D0S | pdb_00008d0s


GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 8D0S designated by the Author
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8D0S_GDP_A_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8D0S_GDP_A_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8D0S_GDP_A_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
8D0S_GDP_A_401 54% 23% 0.164 0.9291.84 1.34 6 300100%1
8D0Q_GDP_A_402 84% 33% 0.097 0.9581.47 1.21 4 400100%0.25
8D0R_GDP_A_401 81% 25% 0.091 0.9412.07 1.04 8 100100%1
8D0U_GDP_A_401 48% 24% 0.192 0.9361.79 1.31 5 400100%1
1TVK_GDP_B_1500 100% 23% 0.012 0.9992.28 0.95 3 280100%1
8QEG_GDP_A_401 100% 51% 0.031 0.9931.02 0.87 3 100100%1
8QEH_GDP_A_405 100% 55% 0.03 0.9930.89 0.85 1 100100%1
9BAJ_GDP_A_203 100% 41% 0.032 0.9941.22 1.1 2 210100%1
1RRG_GDP_A_183 100% 17% 0.036 0.9972.05 1.56 7 300100%1