Ligand validation:8YSM


CTP: CYTIDINE-5'-TRIPHOSPHATE

CTP is a Ligand Of Interest in 8YSM designated by the Author


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8YSM_CTP_A_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8YSM_CTP_A_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8YSM_CTP_A_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
8YSM_CTP_A_401 86% 59% 0.095 0.9630.72 0.84 1 100100%1
8YSU_CTP_A_401 70% 70% 0.102 0.920.45 0.71 - 110100%1
6Q2P_CTP_B_404 100% 47% 0.05 0.9911.24 0.83 4 100100%1
5EWE_CTP_A_501 99% 59% 0.056 0.9880.85 0.73 1 -00100%1
5BO7_CTP_A_410 98% 46% 0.06 0.9850.91 1.17 1 300100%1
2XWL_CTP_A_301 98% 51% 0.056 0.9780.78 1.12 - 210100%1
9F37_CTP_B_804 98% 68% 0.055 0.9760.61 0.61 - -00100%1