RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Structure Author = "Grinter, R."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 40 Structures.

Refinements

Structure Determination Methodology

experimental (40)

Scientific Name of Source Organism

	Mycolicibacterium smegmatis MC2 155 (11)
	Escherichia coli K-12 (7)
	Arabidopsis thaliana (4)
	Pectobacterium atrosepticum SCRI1043 (4)
	Escherichia coli BW25113 (3)
	Pseudomonas aeruginosa str. C 1433 (3)
	Pseudomonas syringae pv. tomato str. DC3000 (3)
	Escherichia coli (2)
	Pectobacterium brasiliense PBR1692 (2)
	Acinetobacter baumannii (1)

More...

Taxonomy

	Bacteria (37)
	Eukaryota (6)
	unclassified bacterial viruses (1)

Experimental Method

	X-RAY DIFFRACTION (34)
	ELECTRON MICROSCOPY (6)

Polymer Entity Type

Protein (40)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (10)
	2.0 - 2.5 (17)
	2.5 - 3.0 (8)
	3.0 - 3.5 (2)
	3.5 - 4.0 (1)
	> 4.5 (1)

Release Date

	2010 - 2014 (8)
	2015 - 2019 (16)
	2020 - 2024 (16)

Enzyme Classification Name

	Oxidoreductases (4)
	Transferases (5)
	Hydrolases (3)

Membrane Protein Annotation

	PDBTM (8)
	MemProtMD (7)
	OPM (6)
	mpstruc (6)

Symmetry Type

	Asymmetric (27)
	Cyclic (18)

SCOP Classification

	Alpha and beta proteins (a+b) (3)
	All alpha proteins (1)
	Artifacts (2)
	Membrane and cell surface proteins and peptides (1)

AllSelected

1 to 25 of 40 Structures

Page 1 of 2

Sort by

Explore in 3D

4FZL \| pdb_00004fzl	Download File View File

High resolution structure of truncated bacteriocin syringacin M from Pseudomonas syringae pv. tomato DC3000

Roszak, A.W., Grinter, R., Cogdell, J.R., Walker, D.

(2012) J Biological Chem 287: 38876-38888

Released	2012-10-03
Method	X-RAY DIFFRACTION 1.46 Å
Organisms	Pseudomonas syringae pv. tomato str. DC3000
Macromolecule	Bacteriocin (protein)
Unique Ligands	CA, CL, EDO, MG

Explore in 3D

4FZM \| pdb_00004fzm	Download File View File

Crystal structure of the bacteriocin syringacin M from Pseudomonas syringae pv. tomato DC3000

Roszak, A.W., Grinter, R., Cogdell, J.R., Walker, D.

(2012) J Biological Chem 287: 38876-38888

Released	2012-10-03
Method	X-RAY DIFFRACTION 2.83 Å
Organisms	Pseudomonas syringae pv. tomato str. DC3000
Macromolecule	Bacteriocin (protein)
Unique Ligands	CA, EDO

Explore in 3D

4FZN \| pdb_00004fzn	Download File View File

Crystal structure of syringacin M mutant D232A from Pseudomonas syringae pv. tomato DC3000

Roszak, A.W., Grinter, R., Cogdell, J.R., Walker, D.

(2012) J Biological Chem 287: 38876-38888

Released	2012-10-03
Method	X-RAY DIFFRACTION 3.12 Å
Organisms	Pseudomonas syringae pv. tomato str. DC3000
Macromolecule	Bacteriocin (protein)

Explore in 3D

4LE7 \| pdb_00004le7	Download File View File

The Crystal Structure of Pyocin L1 at 2.09 Angstroms

Grinter, R., Roszak, A.W., Mccaughey, L., Cogdell, R.J., Walker, D.

(2014) PLoS Pathog 10: e1003898-e1003898

Released	2014-02-19
Method	X-RAY DIFFRACTION 2.09 Å
Organisms	Pseudomonas aeruginosa str. C 1433
Macromolecule	Pyocin L1 (protein)
Unique Ligands	CL, EDO

Explore in 3D

4LEA \| pdb_00004lea	Download File View File

The Crystal Structure of Pyocin L1 bound to D-mannose at 2.55 Angstroms

Grinter, R., Roszak, A.W., Mccaughey, L., Cogdell, C.J., Walker, D.

(2014) PLoS Pathog 10: e1003898-e1003898

Released	2014-02-19
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Pseudomonas aeruginosa str. C 1433
Macromolecule	Pyocin L1 (protein)
Unique Ligands	BMA

Explore in 3D

4LED \| pdb_00004led	Download File View File

The Crystal Structure of Pyocin L1 bound to D-rhamnose at 2.37 Angstroms

Grinter, R., Roszak, A.W., Mccaughey, L., Cogdell, C.J., Walker, D.

(2014) PLoS Pathog 10: e1003898-e1003898

Released	2014-02-19
Method	X-RAY DIFFRACTION 2.37 Å
Organisms	Pseudomonas aeruginosa str. C 1433
Macromolecule	Pyocin L1 (protein)
Unique Ligands	XXR

Explore in 3D

4N58 \| pdb_00004n58	Download File View File

Crystal Structure of Pectocin M2 at 1.86 Angstroms

Grinter, R., Roszak, A.W., Zeth, K., Cogdell, C.J., Walker, D.

(2014) Mol Microbiol 93: 234-246

Released	2014-06-04
Method	X-RAY DIFFRACTION 1.86 Å
Organisms	Pectobacterium brasiliense PBR1692
Macromolecule	Pectocin M2 (protein)
Unique Ligands	CL, FES, GOL, MPD, SO4

Explore in 3D

4N59 \| pdb_00004n59	Download File View File

The Crystal Structure of Pectocin M2 at 2.3 Angstroms

Zeth, K., Grinter, R., Roszak, A.W., Cogdell, R.J., Walker, D.

(2014) Mol Microbiol 93: 234-246

Released	2014-06-04
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Pectobacterium brasiliense PBR1692
Macromolecule	Pectocin M2 (protein)
Unique Ligands	CL, FES, SO4

Explore in 3D

4QKO \| pdb_00004qko	Download File View File

The Crystal Structure of the Pyocin S2 Nuclease Domain, Immunity Protein Complex at 1.8 Angstroms

Grinter, R., Josts, I., Roszak, A.W., Cogdell, C.J., Walker, D.

To be published

Released	2015-06-10
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Pyocin-S2 (protein) Pyocin-S2 immunity protein (protein)
Unique Ligands	BR, MG

Explore in 3D

4RTD \| pdb_00004rtd	Download File View File

Escherichia coli alpha-2-macroglobulin activated by porcine elastase

Fyfe, C.D., Grinter, R., Roszak, A.W., Josts, I., Cogdell, R.J., Walker, D.

(2015) Acta Crystallogr D Biol Crystallogr 71: 1478-1486

Released	2015-07-15
Method	X-RAY DIFFRACTION 3.65 Å
Organisms	Escherichia coli K-12
Macromolecule	Uncharacterized lipoprotein YfhM (protein)

Explore in 3D

4ZGV \| pdb_00004zgv	Download File View File

The Crystal Structure of the Ferredoxin Receptor FusA from Pectobacterium atrosepticum SCRI1043

Grinter, R., Josts, I., Roszak, A.W., Cogdell, R.J., Walker, D.

(2016) Nat Commun 7: 13308-13308

Released	2016-08-31
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Pectobacterium atrosepticum SCRI1043
Macromolecule	Ferredoxin receptor (protein)
Unique Ligands	BOG, LDA

Explore in 3D

4ZHO \| pdb_00004zho	Download File View File

The crystal structure of Arabidopsis ferredoxin 2 with 2Fe-2S cluster

Grinter, R., Josts, I., Roszak, A.W., Cogdell, R.J., Walker, D.

(2016) Nat Commun 7: 13308-13308

Released	2016-08-31
Method	X-RAY DIFFRACTION 2.34 Å
Organisms	Arabidopsis thaliana
Macromolecule	Ferredoxin-2, chloroplastic (protein)
Unique Ligands	CL, FES

Explore in 3D

4ZHP \| pdb_00004zhp	Download File View File

The crystal structure of Potato ferredoxin I with 2Fe-2S cluster

Grinter, R., Josts, I., Roszak, A.W., Cogdell, R.J., Walker, D.

(2016) Nat Commun 7: 13308-13308

Released	2016-08-31
Method	X-RAY DIFFRACTION 2.46 Å
Organisms	Solanum tuberosum
Macromolecule	Potato Ferredoxin I (protein)
Unique Ligands	FES

Explore in 3D

5VTG \| pdb_00005vtg	Download File View File

The structure of TamB963-1138 from Escherichia coli reveals a novel hydrophobic Beta-taco fold

Grinter, R., Josts, I.

(2017) Structure 25: 1898-1906.e5

Released	2017-11-22
Method	X-RAY DIFFRACTION 1.859 Å
Organisms	Escherichia coli K-12
Macromolecule	Translocation and assembly module subunit TamB (protein)

Explore in 3D

6B03 \| pdb_00006b03	Download File View File

The crystal structure of the ferredoxin protease FusC in complex with its substrate plant ferredoxin

Grinter, R.

(2018) PLoS Biol 16: e2006026-e2006026

Released	2018-06-20
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Arabidopsis thaliana Pectobacterium atrosepticum SCRI1043
Macromolecule	Ferredoxin-2, chloroplastic (protein) Putative zinc protease (protein)

Explore in 3D

6B05 \| pdb_00006b05	Download File View File

The Crystal Structure of the Ferredoxin Protease FusC E83A mutant in complex with Arabidopsis Ferredoxin

Grinter, R.

(2018) PLoS Biol 16: e2006026-e2006026

Released	2018-06-20
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Arabidopsis thaliana Pectobacterium atrosepticum SCRI1043
Macromolecule	Ferredoxin-2, chloroplastic (protein) Putative zinc protease (protein)
Unique Ligands	ZN

Explore in 3D

6BPM \| pdb_00006bpm	Download File View File

The crystal structure of the Ferric-Catecholate import receptor Fiu from K12 E. coli: Closed form (C21)

Grinter, R.

(2019) J Biological Chem

Released	2018-11-28
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli K-12
Macromolecule	Catecholate siderophore receptor Fiu (protein)
Unique Ligands	BOG, POG

Explore in 3D

6BPN \| pdb_00006bpn	Download File View File

The crystal structure of the Ferric-Catecholate import receptor Fiu from E. coli K12: Open form (C2221)

Grinter, R.

(2019) J Biological Chem

Released	2018-11-28
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Escherichia coli K-12
Macromolecule	Catecholate siderophore receptor Fiu (protein)
Unique Ligands	BOG, CL, POG, TRS

Explore in 3D

6BPO \| pdb_00006bpo	Download File View File

The crystal structure of the Ferric-Catecholate import receptor Fiu from K12 E. coli: Closed form (P1)

Grinter, R.

(2019) J Biological Chem

Released	2018-11-28
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Escherichia coli K-12
Macromolecule	Catecholate siderophore receptor Fiu (protein)
Unique Ligands	BOG

Explore in 3D

6BRS \| pdb_00006brs	Download File View File

The Crystal Structure of the Ferredoxin Protease FusC in complex with Arabidopsis Ferredoxin, Ethylmercury phosphate soaked dataset

Grinter, R.

(2018) PLoS Biol 16: e2006026-e2006026

Released	2018-06-20
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Arabidopsis thaliana Pectobacterium atrosepticum SCRI1043
Macromolecule	Ferredoxin-2, chloroplastic (protein) Putative zinc protease (protein) unidentified Ferredoxin peptide (protein)
Unique Ligands	HG, PO4

Explore in 3D

6E4V \| pdb_00006e4v	Download File View File

The Crystal Structure of FhuE from E. coli in complex with its substrate Coprogen

Grinter, R., Lithgow, T.

(2019) IUCrJ 6: 401-411

Released	2019-04-10
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli BW25113
Macromolecule	FhuE receptor (protein)
Unique Ligands	BOG, HWS

Explore in 3D

6OFR \| pdb_00006ofr	Download File View File

The crystal structure of the outer membrane transporter YddB from Escherichia coli

Grinter, R.

(2019) PLoS Genet 15: e1008435-e1008435

Released	2019-10-02
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Escherichia coli
Macromolecule	TonB-dependent outer membrane receptor (protein)
Unique Ligands	BOG, GOL, MG

Explore in 3D

6OFS \| pdb_00006ofs	Download File View File

The crystal structure of the periplasmic protease PqqL from Escherichia coli

Grinter, R.

(2019) PLoS Genet 15: e1008435-e1008435

Released	2019-10-02
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Escherichia coli K-12
Macromolecule	Probable zinc protease PqqL (protein)
Unique Ligands	CL, ZN

Explore in 3D

6OFT \| pdb_00006oft	Download File View File

The crystal structure of the first half of the periplasmic protease PqqL from Escherichia coli

Grinter, R.

(2019) PLoS Genet 15: e1008435-e1008435

Released	2019-10-02
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli K-12
Macromolecule	Probable zinc protease PqqL (protein)
Unique Ligands	CL, GOL, PO4

Explore in 3D

6UVX \| pdb_00006uvx	Download File View File

The crystal structure of FbiA from Mycobacterium Smegmatis, Apo state

Grinter, R., Gillett, D., Cordero, P.R.F., Greening, C.

(2020) mSystems 5:

Released	2020-05-13
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Mycolicibacterium smegmatis MC2 155
Macromolecule	Phosphoenolpyruvate transferase (protein)
Unique Ligands	CA

1 to 25 of 40 Structures

Page 1 of 2

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

4FZL | pdb_00004fzl

4FZM | pdb_00004fzm

4FZN | pdb_00004fzn

4LE7 | pdb_00004le7

4LEA | pdb_00004lea

4LED | pdb_00004led

4N58 | pdb_00004n58

4N59 | pdb_00004n59

4QKO | pdb_00004qko

4RTD | pdb_00004rtd

4ZGV | pdb_00004zgv

4ZHO | pdb_00004zho

4ZHP | pdb_00004zhp

5VTG | pdb_00005vtg

6B03 | pdb_00006b03

6B05 | pdb_00006b05

6BPM | pdb_00006bpm

6BPN | pdb_00006bpn

6BPO | pdb_00006bpo

6BRS | pdb_00006brs

6E4V | pdb_00006e4v

6OFR | pdb_00006ofr

6OFS | pdb_00006ofs

6OFT | pdb_00006oft

6UVX | pdb_00006uvx