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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Machuca, M.A."

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Search Summary

This query matches 14 Structures.

Refinements

Structure Determination Methodology

experimental (14)

Scientific Name of Source Organism

	Campylobacter jejuni (8)
	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 (3)
	Escherichia coli (2)
	Helicobacter pylori (1)
	Helicobacter pylori 26695 (1)
	Helicobacter pylori SS1 (1)

Taxonomy

Bacteria (14)

Experimental Method

X-RAY DIFFRACTION (14)

Polymer Entity Type

Protein (14)

Refinement Resolution (Å)

	1.0 - 1.5 (10)
	1.5 - 2.0 (2)
	2.0 - 2.5 (2)

Release Date

	2015 - 2019 (6)
	2020 - 2024 (8)

Symmetry Type

	Asymmetric (12)
	Cyclic (10)

SCOP Classification

	Alpha and beta proteins (a+b) (2)
	Artifacts (2)
	Alpha and beta proteins (a/b) (1)

AllSelected

1 to 14 of 14 Structures

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4WY9 \| pdb_00004wy9	Download File View File

Crystal structure of the periplasmic sensory domain of the Campylobacter jejuni chemoreceptor Tlp1

Roujeinikova, A., Machuca, M.A., Liu, Y.C.

(2016) J Struct Biol 194: 205-213

Released	2016-03-09
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
Macromolecule	Putative MCP-type signal transduction protein (protein)
Unique Ligands	ACT, CL

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4XMQ \| pdb_00004xmq	Download File View File

Crystal structure of the sensory domain of the Campylobacter jejuni chemoreceptor Tlp3 (CcmL)

Roujeinikova, A., Liu, Y.C., Machuca, M.A.

(2015) Acta Crystallogr D Biol Crystallogr 71: 2127-2136

Released	2015-11-04
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
Macromolecule	Putative methyl-accepting chemotaxis signal transduction protein (protein)
Unique Ligands	SO4

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4XMR \| pdb_00004xmr	Download File View File

Crystal structure of the sensory domain of the Campylobacter jejuni chemoreceptor Tlp3 (CcmL) with isoleucine bound.

Roujeinikova, A., Liu, Y.C., Machuca, M.A.

(2015) Acta Crystallogr D Biol Crystallogr 71: 2127-2136

Released	2015-11-04
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
Macromolecule	Putative methyl-accepting chemotaxis signal transduction protein (protein)
Unique Ligands	ILE, SO4

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5WBF \| pdb_00005wbf	Download File View File

Double CACHE (dCACHE) sensing domain of TlpC chemoreceptor from Helicobacter pylori

Machuca, M.A., Johnson, K.S., Liu, Y.C., Steer, D.L., Ottemann, K.M., Roujeinikova, A.

(2017) Sci Rep 7: 14089-14089

Released	2017-11-08
Method	X-RAY DIFFRACTION 2.19 Å
Organisms	Helicobacter pylori 26695
Macromolecule	Methyl-accepting chemotaxis transducer (TlpC) (protein)
Unique Ligands	GOL, LAC

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6OFQ \| pdb_00006ofq	Download File View File

ABC transporter-associated periplasmic binding protein DppA from Helicobacter pylori in complex with peptide STSA

Rahman, M.M., Machuca, M.A., Khan, M.F., Barlow, C.K., Schittenhelm, R.B., Roujeinikova, A.

(2019) J Bacteriol 201:

Released	2019-08-21
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Escherichia coli Helicobacter pylori SS1
Macromolecule	Heme-binding protein A / AI-2 binding protein A (protein) SER-THR-SER-ALA (protein)

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6PU3 \| pdb_00006pu3	Download File View File

ABC transporter-associated periplasmic binding protein DppA from Helicobacter pylori

Rahman, M.M., Machuca, M.A., Khan, M.F., Barlow, C.K., Schittenhelm, R.B., Roujeinikova, A.

(2019) J Bacteriol 201:

Released	2019-08-21
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Escherichia coli Helicobacter pylori
Macromolecule	Heme-binding protein A (protein) SER-THR-SER-ALA (protein)

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6W3O \| pdb_00006w3o	Download File View File

Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with 4-methylisoleucine

Khan, M.F., Machuca, M.A., Rahman, M.M., Roujeinikova, A.

(2020) Biomolecules 10:

Released	2020-05-20
Method	X-RAY DIFFRACTION 1.42 Å
Organisms	Campylobacter jejuni
Macromolecule	Methyl-accepting chemotaxis protein (protein)
Unique Ligands	CL, NA, SKG, SO4

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6W3P \| pdb_00006w3p	Download File View File

Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with beta-methylnorleucine

Khan, M.F., Machuca, M.A., Rahman, M.M., Roujeinikova, A.

(2020) Biomolecules 10:

Released	2020-05-20
Method	X-RAY DIFFRACTION 1.383 Å
Organisms	Campylobacter jejuni
Macromolecule	Methyl-accepting chemotaxis protein (protein)
Unique Ligands	CL, GOL, NA, SKJ, SO4

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6W3R \| pdb_00006w3r	Download File View File

Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with 3-methylisoleucine

Khan, M.F., Machuca, M.A., Rahman, M.M., Roujeinikova, A.

(2020) Biomolecules 10:

Released	2020-05-20
Method	X-RAY DIFFRACTION 1.38 Å
Organisms	Campylobacter jejuni
Macromolecule	Methyl-accepting chemotaxis protein (protein)
Unique Ligands	CL, I2M, NA, SO4

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6W3S \| pdb_00006w3s	Download File View File

Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with L-leucine

Khan, M.F., Machuca, M.A., Rahman, M.M., Roujeinikova, A.

(2020) Biomolecules 10:

Released	2020-05-20
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Campylobacter jejuni
Macromolecule	Methyl-accepting chemotaxis protein (protein)
Unique Ligands	GOL, LEU, SO4

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6W3T \| pdb_00006w3t	Download File View File

Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with L-norvaline

Khan, M.F., Machuca, M.A., Rahman, M.M., Roujeinikova, A.

(2020) Biomolecules 10:

Released	2020-05-20
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Campylobacter jejuni
Macromolecule	Methyl-accepting chemotaxis protein (protein)
Unique Ligands	GOL, NVA, SO4

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6W3V \| pdb_00006w3v	Download File View File

Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with L-phenylalanine

Khan, M.F., Machuca, M.A., Rahman, M.M., Roujeinikova, A.

(2020) Biomolecules 10:

Released	2020-05-20
Method	X-RAY DIFFRACTION 1.47 Å
Organisms	Campylobacter jejuni
Macromolecule	Methyl-accepting chemotaxis protein (protein)
Unique Ligands	CL, NA, PHE, SO4

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6W3X \| pdb_00006w3x	Download File View File

Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with L-valine

Khan, M.F., Machuca, M.A., Rahman, M.M., Roujeinikova, A.

(2020) Biomolecules 10:

Released	2020-05-20
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Campylobacter jejuni
Macromolecule	Methyl-accepting chemotaxis protein (protein)
Unique Ligands	GOL, SO4, VAL

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6W3Y \| pdb_00006w3y	Download File View File

Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with L-alanine

Khan, M.F., Machuca, M.A., Rahman, M.M., Roujeinikova, A.

(2020) Biomolecules 10:

Released	2020-05-20
Method	X-RAY DIFFRACTION 1.32 Å
Organisms	Campylobacter jejuni
Macromolecule	Methyl-accepting chemotaxis protein (protein)
Unique Ligands	ALA, CL, GOL, SO4

1 to 14 of 14 Structures

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4WY9 | pdb_00004wy9

Crystal structure of the periplasmic sensory domain of the Campylobacter jejuni chemoreceptor Tlp1

4XMQ | pdb_00004xmq

Crystal structure of the sensory domain of the Campylobacter jejuni chemoreceptor Tlp3 (CcmL)

4XMR | pdb_00004xmr

Crystal structure of the sensory domain of the Campylobacter jejuni chemoreceptor Tlp3 (CcmL) with isoleucine bound.

5WBF | pdb_00005wbf

Double CACHE (dCACHE) sensing domain of TlpC chemoreceptor from Helicobacter pylori

6OFQ | pdb_00006ofq

ABC transporter-associated periplasmic binding protein DppA from Helicobacter pylori in complex with peptide STSA

6PU3 | pdb_00006pu3

ABC transporter-associated periplasmic binding protein DppA from Helicobacter pylori

6W3O | pdb_00006w3o

Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with 4-methylisoleucine

6W3P | pdb_00006w3p

Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with beta-methylnorleucine

6W3R | pdb_00006w3r

Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with 3-methylisoleucine

6W3S | pdb_00006w3s

Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with L-leucine

6W3T | pdb_00006w3t

Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with L-norvaline

6W3V | pdb_00006w3v

Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with L-phenylalanine

6W3X | pdb_00006w3x

Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with L-valine

6W3Y | pdb_00006w3y

Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with L-alanine

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Symmetry Type

SCOP Classification

4WY9 | pdb_00004wy9

4XMQ | pdb_00004xmq

4XMR | pdb_00004xmr

5WBF | pdb_00005wbf

6OFQ | pdb_00006ofq

6PU3 | pdb_00006pu3

6W3O | pdb_00006w3o

6W3P | pdb_00006w3p

6W3R | pdb_00006w3r

6W3S | pdb_00006w3s

6W3T | pdb_00006w3t

6W3V | pdb_00006w3v

6W3X | pdb_00006w3x

6W3Y | pdb_00006w3y