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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Chen, J.L."

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Search Summary

This query matches 19 Structures.

Refinements

Structure Determination Methodology

experimental (19)

Scientific Name of Source Organism

	Homo sapiens (15)
	synthetic construct (4)
	Influenza A virus (A/California/04/2009(H1N1)) (1)

Taxonomy

	Eukaryota (15)
	other sequences (4)
	Riboviria (1)

Experimental Method

	SOLUTION NMR (14)
	X-RAY DIFFRACTION (5)

Polymer Entity Type

	RNA (14)
	Protein (5)

Refinement Resolution (Å)

	1.5 - 2.0 (2)
	2.0 - 2.5 (1)
	2.5 - 3.0 (2)

Release Date

	2005 - 2009 (1)
	2010 - 2014 (4)
	2015 - 2019 (5)
	2020 - 2024 (9)

Enzyme Classification Name

	Hydrolases (1)
	Transferases (1)

Symmetry Type

	Asymmetric (4)
	Cyclic (3)

SCOP Classification

	All alpha proteins (3)
	All beta proteins (2)
	Artifacts (1)

AllSelected

1 to 19 of 19 Structures

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2MXJ \| pdb_00002mxj	Download File View File

Structural features of a 3' splice site influenza A: 11-nt hairpin

Turner, D.H., Kennedy, S.D., Chen, J.L.

(2015) Biochemistry 54: 3269-3285

Released	2015-05-06
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	RNA_(11-MER) (nucleic acid)

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2MXK \| pdb_00002mxk	Download File View File

Structural features of a 3' splice site influenza A: 19-nt duplex

Turner, D.H., Kennedy, S.D., Chen, J.L.

(2015) Biochemistry 54: 3269-3285

Released	2015-05-06
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	RNA (5'-R(GPCPAPGPGPCPCPCPA)-3') (nucleic acid) RNA (5'-R(UPGPGPGPAPGPUPGPCP*A)-3') (nucleic acid)

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2MXL \| pdb_00002mxl	Download File View File

Structural features of a 3' splice site in influenza A: 39-nt hairpin

Turner, D.H., Kennedy, S.D., Chen, J.L.

(2015) Biochemistry 54: 3269-3285

Released	2015-05-06
Method	SOLUTION NMR
Organisms	synthetic construct
Macromolecule	RNA (39-MER) (nucleic acid)

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3FUR \| pdb_00003fur	Download File View File

Crystal Structure of PPARg in complex with INT131

Wang, Z., Liu, J., Walker, N.

(2009) J Mol Biology 386: 1301-1311

Released	2009-06-09
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Nuclear receptor coactivator 1 (protein) Peroxisome proliferator-activated receptor gamma (protein)
Unique Ligands	CL, Z12

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3KLA \| pdb_00003kla	Download File View File

Ca2+ release from the endoplasmic reticulum of NY-ESO-1 specific T cells is modulated by the affinity of T cell receptor and by the use of the CD8 co-receptor

Chen, J.L., Morgan, A.J., Stewart-Jones, G., Shepherd, D., Bossi, G., Wooldridge, L.

(2010) J Immunol 184: 1829-1839

Released	2010-02-16
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Homo sapiens
Macromolecule	Beta-2-microglobulin (protein) HLA class I histocompatibility antigen, A-2 alpha chain (protein) NYESO-1 peptide analogue (protein)

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3NSS \| pdb_00003nss	Download File View File

The 2009 pandemic H1N1 neuraminidase N1 lacks the 150-cavity in its active sites

Li, Q., Qi, J.X., Zhang, W., Vavricka, C.J., Shi, Y., Gao, G.F.

(2010) Nat Struct Mol Biol 17: 1266-1268

Released	2010-09-22
Method	X-RAY DIFFRACTION 1.902 Å
Organisms	Influenza A virus (A/California/04/2009(H1N1))
Macromolecule	Neuraminidase (protein)
Unique Ligands	ACT, CA, NAG
Unique branched monosaccharides	MAN, NAG

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4E4K \| pdb_00004e4k	Download File View File

Crystal Structure of PPARgamma with the ligand JO21

Pochetti, G., Montanari, R., Loiodice, F., Fracchiolla, G., Laghezza, A., Carbonara, G., Piemontese, L., Lavecchia, A., Novellino, E.

(2013) J Med Chem 56: 60-72

Released	2013-01-23
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	Peroxisome proliferator-activated receptor gamma (protein)
Unique Ligands	RRG

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4E4Q \| pdb_00004e4q	Download File View File

Crystal structure of PPARgamma with the ligand FS214

Pochetti, G., Montanari, R., Loiodice, F., Fracchiolla, G., Laghezza, A., Carbonara, G., Piemontese, L., Lavecchia, A., Novellino, E.

(2013) J Med Chem 56: 60-72

Released	2013-01-23
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	Peroxisome proliferator-activated receptor gamma (protein)
Unique Ligands	RRH

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5VH7 \| pdb_00005vh7	Download File View File

Structure and dynamics of RNA repeat expansions that cause Huntington's Disease and myotonic dystrophy type 1

Chen, J.L., VanEtten, D.M., Fountain, M.A., Yildirim, I., Disney, M.D.

(2017) Biochemistry 56: 3463-3474

Released	2017-06-28
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	RNA (5'-R(GPAPCPCPAPGPCPAP*G)-3') (nucleic acid)

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5VH8 \| pdb_00005vh8	Download File View File

Structure and dynamics of RNA repeat expansions that cause Huntington's Disease and myotonic dystrophy type 1

Chen, J.L., VanEtten, D.M., Fountain, M.A., Yildirim, I., Disney, M.D.

(2017) Biochemistry 56: 3463-3474

Released	2017-06-28
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	RNA (5'-R(GPAPCPCPUPGPCPUPGPCPUPGPGPUP*C)-3') (nucleic acid)

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6VA1 \| pdb_00006va1	Download File View File

Solution Structure of the Tau pre-mRNA Exon 10 Splicing Regulatory Element

Chen, J.L., Fountain, M.A., Disney, M.D.

(2020) J Am Chem Soc 142: 8706-8727

Released	2020-05-20
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	RNA (5'-R(CPAPCPAPCPGPUPCPGPG)-3') (nucleic acid) RNA (5'-R(CPCPGPGPCPAPGPUPGPUP*G)-3') (nucleic acid)

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6VA2 \| pdb_00006va2	Download File View File

Solution Structure of the Tau pre-mRNA Exon 10 Splicing Regulatory Element Bound to MH5

Chen, J.L., Fountain, M.A., Disney, M.D.

(2020) J Am Chem Soc 142: 8706-8727

Released	2020-05-20
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	RNA (5'-R(CPAPCPAPCPGPUPCPGPG)-3') (nucleic acid) RNA (5'-R(CPCPGPGPCPAPGPUPGPUP*G)-3') (nucleic acid)
Unique Ligands	QSV

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6VA3 \| pdb_00006va3	Download File View File

Solution Structure of the Tau pre-mRNA Exon 10 Splicing Regulatory Element Bound to MQC

Chen, J.L., Fountain, M.A., Disney, M.D.

(2020) J Am Chem Soc 142: 8706-8727

Released	2020-05-20
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	RNA (5'-R(CPAPCPAPCPGPUPCPGPG)-3') (nucleic acid) RNA (5'-R(CPCPGPGPCPAPGPUPGPUP*G)-3') (nucleic acid)
Unique Ligands	MQC

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6VA4 \| pdb_00006va4	Download File View File

Solution Structure of the Tau pre-mRNA Exon 10 Splicing Regulatory Element Bound to MIP

Chen, J.L., Fountain, M.A., Disney, M.D.

(2020) J Am Chem Soc 142: 8706-8727

Released	2020-05-20
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	RNA (5'-R(CPAPCPAPCPGPUPCPGPG)-3') (nucleic acid) RNA (5'-R(CPCPGPGPCPAPGPUPGPUP*G)-3') (nucleic acid)
Unique Ligands	QSY

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9CPD \| pdb_00009cpd	Download File View File

Structures of small molecules bound to RNA repeat expansions that cause Huntington's disease-like 2 and myotonic dystrophy type 1

Chen, J.L., Taghavi, A., Disney, M.D., Fountain, M.A., Childs-Disney, J.L.

(2024) Bioorg Med Chem Lett 111: 129888-129888

Released	2024-08-07
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	RNA (5'-R(GPAPCPAPGPCPUPGPCPUPGPUP*C)-3') (nucleic acid)
Unique Ligands	MQC

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9CPG \| pdb_00009cpg	Download File View File

Structures of small molecules bound to RNA repeat expansions that cause Huntington's disease-like 2 and myotonic dystrophy type 1

Chen, J.L., Taghavi, A., Disney, M.D., Fountain, M.A., Childs-Disney, J.L.

(2024) Bioorg Med Chem Lett 129888-129888

Released	2024-08-07
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	RNA (5'-R(GPAPCPAPGPCPUPGPCPUPGPUP*C)-3') (nucleic acid)
Unique Ligands	A1AZM

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9CPI \| pdb_00009cpi	Download File View File

Structures of small molecules bound to RNA repeat expansions that cause Huntington's disease-like 2 and myotonic dystrophy type 1

Chen, J.L., Taghavi, A., Disney, M.D., Fountain, M.A., Childs-Disney, J.L.

(2024) Bioorg Med Chem Lett 111: 129888-129888

Released	2024-08-07
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	RNA (5'-R(GPAPCPAPGPCPUPGPCPUPGPUP*C)-3') (nucleic acid)
Unique Ligands	A1AZL

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9CPJ \| pdb_00009cpj	Download File View File

Structures of small molecules bound to RNA repeat expansions that cause Huntington's disease-like 2 and myotonic dystrophy type 1

Chen, J.L., Taghavi, A., Disney, M.D., Fountain, M.A., Childs-Disney, J.L.

(2024) Bioorg Med Chem Lett 129888-129888

Released	2024-08-07
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	RNA (5'-R(GPAPCPAPGPCPUPGPCPUPGPUP*C)-3') (nucleic acid)

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9DLL \| pdb_00009dll	Download File View File

NMR structures of small molecules bound to a model of an RNA CAG repeat expansion.

Chen, J.L., Taghavi, A., Disney, M.D., Fountain, M.A., Childs-Disney, J.L.

(2024) Nucleic Acids Res

Released	2024-09-25
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	CAG 13-mer RNA (5'-R(GPAPCPAPGPCPAPGPCPUPGPUP*C)-3') (nucleic acid)
Unique Ligands	A1AZM

1 to 19 of 19 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

2MXJ | pdb_00002mxj

Structural features of a 3' splice site influenza A: 11-nt hairpin

2MXK | pdb_00002mxk

Structural features of a 3' splice site influenza A: 19-nt duplex

2MXL | pdb_00002mxl

Structural features of a 3' splice site in influenza A: 39-nt hairpin

3FUR | pdb_00003fur

Crystal Structure of PPARg in complex with INT131

3KLA | pdb_00003kla

Ca2+ release from the endoplasmic reticulum of NY-ESO-1 specific T cells is modulated by the affinity of T cell receptor and by the use of the CD8 co-receptor

3NSS | pdb_00003nss

The 2009 pandemic H1N1 neuraminidase N1 lacks the 150-cavity in its active sites

4E4K | pdb_00004e4k

Crystal Structure of PPARgamma with the ligand JO21

4E4Q | pdb_00004e4q

Crystal structure of PPARgamma with the ligand FS214

5VH7 | pdb_00005vh7

Structure and dynamics of RNA repeat expansions that cause Huntington's Disease and myotonic dystrophy type 1

5VH8 | pdb_00005vh8

Structure and dynamics of RNA repeat expansions that cause Huntington's Disease and myotonic dystrophy type 1

6VA1 | pdb_00006va1

Solution Structure of the Tau pre-mRNA Exon 10 Splicing Regulatory Element

6VA2 | pdb_00006va2

Solution Structure of the Tau pre-mRNA Exon 10 Splicing Regulatory Element Bound to MH5

6VA3 | pdb_00006va3

Solution Structure of the Tau pre-mRNA Exon 10 Splicing Regulatory Element Bound to MQC

6VA4 | pdb_00006va4

Solution Structure of the Tau pre-mRNA Exon 10 Splicing Regulatory Element Bound to MIP

9CPD | pdb_00009cpd

Structures of small molecules bound to RNA repeat expansions that cause Huntington's disease-like 2 and myotonic dystrophy type 1

9CPG | pdb_00009cpg

Structures of small molecules bound to RNA repeat expansions that cause Huntington's disease-like 2 and myotonic dystrophy type 1

9CPI | pdb_00009cpi

Structures of small molecules bound to RNA repeat expansions that cause Huntington's disease-like 2 and myotonic dystrophy type 1

9CPJ | pdb_00009cpj

Structures of small molecules bound to RNA repeat expansions that cause Huntington's disease-like 2 and myotonic dystrophy type 1

9DLL | pdb_00009dll

NMR structures of small molecules bound to a model of an RNA CAG repeat expansion.

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2MXJ | pdb_00002mxj

2MXK | pdb_00002mxk

2MXL | pdb_00002mxl

3FUR | pdb_00003fur

3KLA | pdb_00003kla

3NSS | pdb_00003nss

4E4K | pdb_00004e4k

4E4Q | pdb_00004e4q

5VH7 | pdb_00005vh7

5VH8 | pdb_00005vh8

6VA1 | pdb_00006va1

6VA2 | pdb_00006va2

6VA3 | pdb_00006va3

6VA4 | pdb_00006va4

9CPD | pdb_00009cpd

9CPG | pdb_00009cpg

9CPI | pdb_00009cpi

9CPJ | pdb_00009cpj

9DLL | pdb_00009dll