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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Su, H.N."

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Search Summary

This query matches 26 Structures.

Refinements

Structure Determination Methodology

experimental (26)

Scientific Name of Source Organism

	Pseudoalteromonas sp. SM9913 (6)
	Roseovarius nubinhibens ISM (4)
	Ruegeria lacuscaerulensis ITI-1157 (4)
	Chroomonas placoidea (2)
	Vibrio variabilis (2)
	uncultured bacterium (2)
	Myroides profundi (1)
	Pseudanabaena sp. lw0831 (1)
	Pseudoalteromonas sp. CF6-2 (1)
	Ruegeria pomeroyi DSS-3 (1)

More...

Taxonomy

	Bacteria (23)
	Eukaryota (3)

Experimental Method

	X-RAY DIFFRACTION (24)
	ELECTRON MICROSCOPY (2)

Polymer Entity Type

Protein (26)

Refinement Resolution (Å)

	1.5 - 2.0 (12)
	2.0 - 2.5 (11)
	2.5 - 3.0 (3)

Release Date

	2010 - 2014 (1)
	2015 - 2019 (19)
	2020 - 2024 (6)

Enzyme Classification Name

	Oxidoreductases (9)
	Hydrolases (2)

Membrane Protein Annotation

	PDBTM (2)
	OPM (1)

Symmetry Type

	Asymmetric (14)
	Cyclic (13)
	Dihedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (5)
	All alpha proteins (1)
	Artifacts (1)

AllSelected

1 to 25 of 26 Structures

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3VV3 \| pdb_00003vv3	Download File View File

Crystal structure of deseasin MCP-01 from Pseudoalteromonas sp. SM9913

Zhao, G.Y., Gao, X., Chen, X.L., Zhang, Y.Z.

(2013) Mol Microbiol 90: 997-1010

Released	2013-08-07
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Pseudoalteromonas sp. SM9913
Macromolecule	Deseasin MCP-01 (protein)
Unique Ligands	CA

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4QFK \| pdb_00004qfk	Download File View File

Crystal structure of dipeptide binding protein from pseudoalteromonas sp. SM9913

Li, C.Y., Zhang, Y.Z.

(2015) J Bacteriol 197: 1125-1134

Released	2015-01-28
Method	X-RAY DIFFRACTION 2.288 Å
Organisms	Pseudoalteromonas sp. SM9913
Macromolecule	ABC transporter periplasmic peptide-binding protein (protein)

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4QFL \| pdb_00004qfl	Download File View File

Crystal structure of dipeptide binding protein from pseudoalteromonas sp. SM9913 in complex with Ala-Phe

Li, C.Y., Zhang, Y.Z.

(2015) J Bacteriol 197: 1125-1134

Released	2015-01-28
Method	X-RAY DIFFRACTION 1.749 Å
Organisms	Pseudoalteromonas sp. SM9913
Macromolecule	ABC transporter periplasmic peptide-binding protein (protein)
Unique Ligands	ALA, GOL, PHE

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4QFN \| pdb_00004qfn	Download File View File

Crystal structure of dipeptide binding protein from pseudoalteromonas sp. SM9913 in complex with Gly-Glu

Li, C.Y., Zhang, Y.Z.

(2015) J Bacteriol 197: 1125-1134

Released	2015-01-28
Method	X-RAY DIFFRACTION 2.297 Å
Organisms	Pseudoalteromonas sp. SM9913
Macromolecule	ABC transporter periplasmic peptide-binding protein (protein)
Unique Ligands	GLU, GLY

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4QFO \| pdb_00004qfo	Download File View File

Crystal structure of dipeptide binding protein from pseudoalteromonas sp. SM9913 in complex with Met-Leu

Li, C.Y., Zhang, Y.Z.

(2015) J Bacteriol 197: 1125-1134

Released	2015-01-28
Method	X-RAY DIFFRACTION 2.304 Å
Organisms	Pseudoalteromonas sp. SM9913
Macromolecule	ABC transporter periplasmic peptide-binding protein (protein)
Unique Ligands	GOL, LEU, MET

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4QFP \| pdb_00004qfp	Download File View File

Crystal structure of dipeptide binding protein from pseudoalteromonas sp. SM9913 in complex with Val-Thr

Li, C.Y., Zhang, Y.Z.

(2015) J Bacteriol 197: 1125-1134

Released	2015-01-28
Method	X-RAY DIFFRACTION 1.903 Å
Organisms	Pseudoalteromonas sp. SM9913
Macromolecule	ABC transporter periplasmic peptide-binding protein (protein)
Unique Ligands	GOL, PO4, THR, VAL

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4RZY \| pdb_00004rzy	Download File View File

Crystal structure of metallopeptidase-like dimethylsulphoniopropionate (DMSP) lyase RlDddP in complex with MES

Zhang, Y., Wang, P.

(2015) Mol Microbiol 98: 289-301

Released	2015-08-05
Method	X-RAY DIFFRACTION 1.949 Å
Organisms	Ruegeria lacuscaerulensis ITI-1157
Macromolecule	Peptidase M24 (protein)
Unique Ligands	FE, MES

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4RZZ \| pdb_00004rzz	Download File View File

Crystal structure of metallopeptidase-like dimethylsulphoniopropionate (DMSP) lyase RlDddP in complex with phosphate

Zhang, Y., Wang, P.

(2015) Mol Microbiol 98: 289-301

Released	2015-08-05
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Ruegeria lacuscaerulensis ITI-1157
Macromolecule	Peptidase M24 (protein)
Unique Ligands	FE, GOL, PO4

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4S00 \| pdb_00004s00	Download File View File

Crystal structure of metallopeptidase-like dimethylsulphoniopropionate (DMSP) lyase RlDddP mutant Y366A in complex with acrylate

Zhang, Y., Wang, P.

(2015) Mol Microbiol 98: 289-301

Released	2015-08-05
Method	X-RAY DIFFRACTION 2.099 Å
Organisms	Ruegeria lacuscaerulensis ITI-1157
Macromolecule	Peptidase M24 (protein)
Unique Ligands	AKR, FE, GOL

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4S01 \| pdb_00004s01	Download File View File

Crystal structure of metallopeptidase-like dimethylsulphoniopropionate (DMSP) lyase RlDddP mutant D377N in complex with acrylate

Zhang, Y., Wang, P.

(2015) Mol Microbiol 98: 289-301

Released	2015-08-05
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Ruegeria lacuscaerulensis ITI-1157
Macromolecule	Peptidase M24 (protein)
Unique Ligands	AKR, FE, GOL

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4XVC \| pdb_00004xvc	Download File View File

Crystal structure of an esterase from the bacterial hormone-sensitive lipase (HSL) family

Zhang, Y., Li, P.

(2015) J Biological Chem 290: 11188-11198

Released	2015-03-25
Method	X-RAY DIFFRACTION 2 Å
Organisms	environmental samples
Macromolecule	Esterase E40 (protein)
Unique Ligands	PMS

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4XZ6 \| pdb_00004xz6	Download File View File

TmoX in complex with TMAO

Zhang, Y.Z., Li, C.Y.

(2015) J Bacteriol 197: 3378-3387

Released	2015-08-19
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Ruegeria pomeroyi DSS-3
Macromolecule	Glycine betaine/proline ABC transporter, periplasmic substrate-binding protein (protein)
Unique Ligands	CA, GOL, TMO, TRS

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5GMR \| pdb_00005gmr	Download File View File

Crystal structure of the mutant M3+S202W/I203F of the esterase E40

Zhang, Y.-Z., Li, P.-Y.

(2017) Appl Environ Microbiol 83:

Released	2017-07-19
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	uncultured bacterium
Macromolecule	Esterase (protein)

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5GMS \| pdb_00005gms	Download File View File

Crystal structure of the mutant S202W/I203F of the esterase E40

Zhang, Y.-Z., Li, P.-Y.

(2017) Appl Environ Microbiol 83:

Released	2017-07-19
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	uncultured bacterium
Macromolecule	Esterase (protein)

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5GSN \| pdb_00005gsn	Download File View File

Tmm in complex with methimazole

Zhang, Y.Z., Li, C.Y.

(2017) Mol Microbiol 103: 992-1003

Released	2017-01-18
Method	X-RAY DIFFRACTION 2.203 Å
Organisms	Roseovarius nubinhibens ISM
Macromolecule	Flavin-containing monooxygenase (protein)
Unique Ligands	FAD, MMZ, NAP

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5IPY \| pdb_00005ipy	Download File View File

Crystal structure of WT RnTmm

Li, C.Y., Zhang, Y.Z.

(2017) Mol Microbiol 103: 992-1003

Released	2017-01-18
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Roseovarius nubinhibens ISM
Macromolecule	Flavin-containing monooxygenase (protein)
Unique Ligands	FAD, NAP

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5IQ1 \| pdb_00005iq1	Download File View File

Crystal structure of RnTmm mutant Y207S

Li, C.Y., Zhang, Y.Z.

(2017) Mol Microbiol 103: 992-1003

Released	2017-01-18
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Roseovarius nubinhibens ISM
Macromolecule	Flavin-containing monooxygenase (protein)
Unique Ligands	FAD, NAP

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5IQ4 \| pdb_00005iq4	Download File View File

Crystal structure of RnTmm mutant Y207S soaking

Zhang, Y.Z., Li, C.Y.

(2017) Mol Microbiol 103: 992-1003

Released	2017-01-18
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Roseovarius nubinhibens ISM
Macromolecule	Flavin-containing monooxygenase (protein)
Unique Ligands	FAD, NAP

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5TOU \| pdb_00005tou	Download File View File

STRUCTURE OF C-PHYCOCYANIN FROM ARCTIC PSEUDANABAENA SP. LW0831

Wang, Q.M., Li, C.Y., Su, H.N., Zhang, Y.Z., Xie, B.B.

(2017) Biochim Biophys Acta 1858: 325-335

Released	2017-03-08
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Pseudanabaena sp. lw0831
Macromolecule	Phycocyanin alpha-1 subunit (protein) Phycocyanin beta-1 subunit (protein)
Unique Ligands	CYC

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6IK4 \| pdb_00006ik4	Download File View File

A Novel M23 Metalloprotease Pseudoalterin from Deep-sea

Zhao, H.L., Tang, B.L., Yang, J., Chen, X.L., Zhang, Y.Z.

(2020) Nat Commun 11: 285-285

Released	2019-10-16
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Pseudoalteromonas sp. CF6-2
Macromolecule	Elastinolytic metalloprotease (protein)
Unique Ligands	GOL, ZN

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6J75 \| pdb_00006j75	Download File View File

Structure of 3,6-anhydro-L-galactose Dehydrogenase

Li, P.Y., Wang, Y., Chen, X.L., Zhang, Y.Z.

(2020) J Mol Biology 432: 2186-2203

Released	2020-01-22
Method	X-RAY DIFFRACTION 2.695 Å
Organisms	Vibrio variabilis
Macromolecule	Aldehyde dehydrogenase A (protein)

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6J76 \| pdb_00006j76	Download File View File

Structure of 3,6-anhydro-L-galactose Dehydrogenase in Complex with NAP

Li, P.Y., Wang, Y., Chen, X.L., Zhang, Y.Z.

(2020) J Mol Biology 432: 2186-2203

Released	2020-01-22
Method	X-RAY DIFFRACTION 2.368 Å
Organisms	Vibrio variabilis
Macromolecule	Aldehyde dehydrogenase A (protein)
Unique Ligands	NAP

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6KBW \| pdb_00006kbw	Download File View File

Crystal structure of Tmm from Myroides profundi D25

Li, C.Y., Zhang, Y.Z.

(2021) Sci Adv 7:

Released	2020-07-08
Method	X-RAY DIFFRACTION 1.686 Å
Organisms	Myroides profundi
Macromolecule	Trimethylamine monooxygenase (protein)
Unique Ligands	FAD, NAP

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7ESI \| pdb_00007esi	Download File View File

Crystal structure of the collagenase unit of a Vibrio collagenase from Vibrio harveyi VHJR7 at 1. 8 angstrom resolution.

Cao, H.Y., Wang, Y., Peng, M., Zhang, Y.Z.

(2022) Nat Commun 13: 566-566

Released	2022-02-09
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Vibrio harveyi VHJR7
Macromolecule	Collagenase unit (CU) (protein) Peptide P1 (protein) Peptide P2 (protein)
Unique Ligands	CA, ZN

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7Y7B \| pdb_00007y7b	Download File View File

Cryo-EM structure of cryptophyte photosystem I

Zhao, L.S., Li, K., Zhang, Y.Z., Liu, L.N.

(2023) Plant Cell 35: 2449-2463

Released	2023-04-12
Method	ELECTRON MICROSCOPY 2.66 Å
Organisms	Chroomonas placoidea
Macromolecule	Unique protein chains: 28
Unique Ligands	8CT, CLA, DGD, IHT, II0, II3, KC2, LHG, LMG, LMU, PQN, SF4, SQD

1 to 25 of 26 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

3VV3 | pdb_00003vv3

4QFK | pdb_00004qfk

4QFL | pdb_00004qfl

4QFN | pdb_00004qfn

4QFO | pdb_00004qfo

4QFP | pdb_00004qfp

4RZY | pdb_00004rzy

4RZZ | pdb_00004rzz

4S00 | pdb_00004s00

4S01 | pdb_00004s01

4XVC | pdb_00004xvc

4XZ6 | pdb_00004xz6

5GMR | pdb_00005gmr

5GMS | pdb_00005gms

5GSN | pdb_00005gsn

5IPY | pdb_00005ipy

5IQ1 | pdb_00005iq1

5IQ4 | pdb_00005iq4

5TOU | pdb_00005tou

6IK4 | pdb_00006ik4

6J75 | pdb_00006j75

6J76 | pdb_00006j76

6KBW | pdb_00006kbw

7ESI | pdb_00007esi

7Y7B | pdb_00007y7b