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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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Search Summary

This query matches 88 Structures.

Refinements

Structure Determination Methodology

experimental (88)

Scientific Name of Source Organism

	Homo sapiens (76)
	Tetrahymena thermophila SB210 (11)
	Paramecium tetraurelia strain d4-2 (2)
	Caenorhabditis elegans (1)

Taxonomy

Eukaryota (88)

Experimental Method

	X-RAY DIFFRACTION (85)
	ELECTRON MICROSCOPY (2)
	SOLUTION NMR (1)
	SOLUTION SCATTERING (1)

Polymer Entity Type

	Protein (88)
	RNA (2)

Refinement Resolution (Å)

	1.5 - 2.0 (24)
	2.0 - 2.5 (35)
	2.5 - 3.0 (18)
	3.0 - 3.5 (8)
	3.5 - 4.0 (2)

Release Date

	2005 - 2009 (1)
	2015 - 2019 (17)
	2020 - 2024 (67)
	2025 - 2029 (3)

Enzyme Classification Name

Transferases (88)

Symmetry Type

	Asymmetric (88)
	Dihedral (1)

SCOP Classification

Alpha and beta proteins (a/b) (2)

AllSelected

1 to 25 of 88 Structures

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2H00 \| pdb_00002h00	Download File View File

Human methyltransferase 10 domain containing protein

Min, J.R., Wu, H., Zeng, H., Loppnau, P., Weigelt, J., Sundstrom, M., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Plotnikov, A.N., Structural Genomics Consortium (SGC)

To be published

Released	2006-06-13
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	methyltransferase 10 domain containing protein (protein)
Unique Ligands	CL, DTU, SAH

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5IL0 \| pdb_00005il0	Download File View File

Crystal structural of the METTL3-METTL14 complex for N6-adenosine methylation

Wang, X., Guan, Z., Zou, T., Yin, P.

(2016) Nature 534: 575-578

Released	2016-05-25
Method	X-RAY DIFFRACTION 1.882 Å
Organisms	Homo sapiens
Macromolecule	METTL14 (protein) METTL3 (protein)
Unique Ligands	BR, EDO

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5IL1 \| pdb_00005il1	Download File View File

Crystal structure of SAM-bound METTL3-METTL14 complex

Wang, X., Guan, Z., Zou, T., Yin, P.

(2016) Nature 534: 575-578

Released	2016-05-25
Method	X-RAY DIFFRACTION 1.71 Å
Organisms	Homo sapiens
Macromolecule	METTL14 (protein) METTL3 (protein)
Unique Ligands	EDO, SAM

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5IL2 \| pdb_00005il2	Download File View File

Crystal structure of SAH-bound METTL3-METTL14 complex

Wang, X., Guan, Z., Zou, T., Yin, P.

(2016) Nature 534: 575-578

Released	2016-05-25
Method	X-RAY DIFFRACTION 1.606 Å
Organisms	Homo sapiens
Macromolecule	METTL14 (protein) METTL3 (protein)
Unique Ligands	EDO, SAH

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5K7M \| pdb_00005k7m	Download File View File

Crystal structure of the catalytic domains of Mettl3/Mettl14 complex

Wang, P., Doxtader, K.A., Nam, Y.

(2016) Mol Cell 63: 306-317

Released	2016-07-06
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Homo sapiens
Macromolecule	N6-adenosine-methyltransferase 70 kDa subunit (protein) N6-adenosine-methyltransferase subunit METTL14 (protein)

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5K7U \| pdb_00005k7u	Download File View File

Crystal structure of the catalytic domains of Mettl3/Mettl14 complex with SAM

Wang, P., Doxtader, K.A., Nam, Y.

(2016) Mol Cell 63: 306-317

Released	2016-07-06
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	N6-adenosine-methyltransferase 70 kDa subunit (protein) N6-adenosine-methyltransferase subunit METTL14 (protein)
Unique Ligands	SAM

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5K7W \| pdb_00005k7w	Download File View File

Crystal structure of the catalytic domain of Mettl3/Mettl14 complex with SAH

Wang, P., Doxtader, K.A., Nam, Y.

(2016) Mol Cell 63: 306-317

Released	2016-07-06
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Homo sapiens
Macromolecule	N6-adenosine-methyltransferase 70 kDa subunit (protein) N6-adenosine-methyltransferase subunit METTL14 (protein)
Unique Ligands	SAH

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5L6D \| pdb_00005l6d	Download File View File

Crystal structure of the human METTL3-METTL14 complex bound to SAH

Sledz, P., Jinek, M.

(2016) Elife 5:

Released	2016-10-12
Method	X-RAY DIFFRACTION 1.852 Å
Organisms	Homo sapiens
Macromolecule	N6-adenosine-methyltransferase 70 kDa subunit (protein) N6-adenosine-methyltransferase subunit METTL14 (protein)
Unique Ligands	ACT, MG, SAH

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5L6E \| pdb_00005l6e	Download File View File

Crystal structure of the human METTL3-METTL14 complex bound to SAM

Sledz, P., Jinek, M.

(2016) Elife 5:

Released	2016-10-12
Method	X-RAY DIFFRACTION 1.901 Å
Organisms	Homo sapiens
Macromolecule	N6-adenosine-methyltransferase 70 kDa subunit (protein) N6-adenosine-methyltransferase subunit METTL14 (protein)
Unique Ligands	ACT, MG, SAM

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5TEY \| pdb_00005tey	Download File View File

Human METTL3-METTL14 complex

DONG, A., ZENG, H., LI, Y., TEMPEL, W., Seitova, A., Hutchinson, A., Bountra, C., Arrowsmith, C.H., Edwards, A.M., BROWN, P.J., WU, H., Structural Genomics Consortium (SGC)

To be published

Released	2016-11-23
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	N6-adenosine-methyltransferase 70 kDa subunit (protein) N6-adenosine-methyltransferase subunit METTL14 (protein)
Unique Ligands	BME, EDO, MG, SAH, UNX

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5YZ9 \| pdb_00005yz9	Download File View File

zinc finger domain of METTL3-METTL14 N6-methyladenosine methyltransferase

Dong, X., Tang, C., Gong, Z., Yin, P., Huang, J.B.

(2019) Protein Cell 10: 272-284

Released	2018-03-28
Method	SOLUTION NMR SOLUTION SCATTERING
Organisms	Homo sapiens
Macromolecule	N6-adenosine-methyltransferase catalytic subunit (protein)
Unique Ligands	ZN

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6B91 \| pdb_00006b91	Download File View File

Crystal structure of the N-terminal domain of human METTL16

Ruszkowska, A., Ruszkowski, M., Dauter, Z., Brown, J.A.

(2018) Sci Rep 8: 5311-5311

Released	2018-04-04
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Homo sapiens
Macromolecule	U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase (protein)
Unique Ligands	EDO, NA

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6B92 \| pdb_00006b92	Download File View File

Crystal Structure of the N-terminal domain of human METTL16 in complex with SAH

Ruszkowska, A., Ruszkowski, M., Dauter, Z., Brown, J.A.

(2018) Sci Rep 8: 5311-5311

Released	2018-04-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase (protein)
Unique Ligands	EDO, SAH

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6DU4 \| pdb_00006du4	Download File View File

Crystal structure of hMettl16 catalytic domain in complex with MAT2A 3'UTR hairpin 1

Doxtader, K., Wang, P., Nam, Y.

(2018) Mol Cell 71: 1001-1011.e4

Released	2018-09-26
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase (protein) hp1x-RNA (29-MER) (nucleic acid)
Unique Ligands	GOL, TRS

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6DU5 \| pdb_00006du5	Download File View File

Crystal structure of hMettl16 catalytic domain in complex with MAT2A 3'UTR hairpin 6

Doxtader, K., Wang, P., Nam, Y.

(2018) Mol Cell 71: 1001-1011.e4

Released	2018-09-26
Method	X-RAY DIFFRACTION 3.006 Å
Organisms	Homo sapiens
Macromolecule	U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase (protein) hp6-RNA (25-MER) (nucleic acid)

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6GFK \| pdb_00006gfk	Download File View File

delta-N METTL16 MTase domain

Chen, K.M., Mendel, M., Homolka, D., McCarthy, A.A., Pillai, R.S.

(2018) Mol Cell 71: 986-1000.e11

Released	2018-09-19
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase (protein)
Unique Ligands	SAH, SO4

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6GFN \| pdb_00006gfn	Download File View File

METTL16 MTase domain

Chen, K.M., Mendel, M., Homolka, D., McCarthy, A.A., Pillai, R.S.

(2018) Mol Cell 71: 986-1000.e11

Released	2018-09-19
Method	X-RAY DIFFRACTION 2.86 Å
Organisms	Homo sapiens
Macromolecule	U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase (protein)
Unique Ligands	SAH

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6GT5 \| pdb_00006gt5	Download File View File

METTL16 MTase domain (crystal form 2)

Chen, K.M., Mendel, M., Homolka, D., McCarthy, A.A., Pillai, R.S.

(2018) Mol Cell 71: 986-1000.e11

Released	2018-09-19
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Homo sapiens
Macromolecule	U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase (protein)

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6M1U \| pdb_00006m1u	Download File View File

Crystal structure of the vertebrate conserved region (VCR) of human METTL16

Aoyama, T., Yamashita, S., Tomita, K.

(2020) Nucleic Acids Res 48: 5157-5168

Released	2020-04-01
Method	X-RAY DIFFRACTION 2.791 Å
Organisms	Homo sapiens
Macromolecule	RNA N6-adenosine-methyltransferase METTL16,RNA N6-adenosine-methyltransferase METTL16 (protein)

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6TTP \| pdb_00006ttp	Download File View File

Crystal structure of the human METTL3-METTL14 complex bound to Compound 1/Adenosine (DHU_M3M_023)

Bedi, R.K., Huang, D., Sledz, P., Caflisch, A.

(2020) ChemMedChem 15: 744-748

Released	2020-03-04
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	N6-adenosine-methyltransferase catalytic subunit (protein) N6-adenosine-methyltransferase non-catalytic subunit (protein)
Unique Ligands	ACT, ADN

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6TTT \| pdb_00006ttt	Download File View File

Crystal structure of the human METTL3-METTL14 complex bound to Compound 2 (ASI_M3M_140)

Bedi, R.K., Huang, D., Sledz, P., Caflisch, A.

(2020) ChemMedChem 15: 744-748

Released	2020-03-04
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	N6-adenosine-methyltransferase catalytic subunit (protein) N6-adenosine-methyltransferase non-catalytic subunit (protein)
Unique Ligands	ACT, NWQ

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6TTV \| pdb_00006ttv	Download File View File

Crystal structure of the human METTL3-METTL14 complex bound to Compound 3 (ASI_M3M_138)

Bedi, R.K., Huang, D., Sledz, P., Caflisch, A.

(2020) ChemMedChem 15: 744-748

Released	2020-03-04
Method	X-RAY DIFFRACTION 2.14 Å
Organisms	Homo sapiens
Macromolecule	N6-adenosine-methyltransferase catalytic subunit (protein) N6-adenosine-methyltransferase non-catalytic subunit (protein)
Unique Ligands	ACT, NWW

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6TTW \| pdb_00006ttw	Download File View File

Crystal structure of the human METTL3-METTL14 complex bound to Compound 4 (ASI_M3M_047)

Bedi, R.K., Huang, D., Sledz, P., Caflisch, A.

(2020) ChemMedChem 15: 744-748

Released	2020-03-04
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	N6-adenosine-methyltransferase catalytic subunit (protein) N6-adenosine-methyltransferase non-catalytic subunit (protein)
Unique Ligands	ACT, NWZ

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6TTX \| pdb_00006ttx	Download File View File

Crystal structure of the human METTL3-METTL14 complex bound to Compound 5 (ASI_M3M_051)

Bedi, R.K., Huang, D., Sledz, P., Caflisch, A.

(2020) ChemMedChem 15: 744-748

Released	2020-03-04
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	N6-adenosine-methyltransferase catalytic subunit (protein) N6-adenosine-methyltransferase non-catalytic subunit (protein)
Unique Ligands	ACT, NX8

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6TU1 \| pdb_00006tu1	Download File View File

Crystal structure of the human METTL3-METTL14 complex bound to Compound 8 (ASI_M3M_091)

Bedi, R.K., Huang, D., Sledz, P., Caflisch, A.

(2020) ChemMedChem 15: 744-748

Released	2020-03-04
Method	X-RAY DIFFRACTION 2.31 Å
Organisms	Homo sapiens
Macromolecule	N6-adenosine-methyltransferase catalytic subunit (protein) N6-adenosine-methyltransferase non-catalytic subunit (protein)
Unique Ligands	ACT, NXB

1 to 25 of 88 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2H00 | pdb_00002h00

5IL0 | pdb_00005il0

5IL1 | pdb_00005il1

5IL2 | pdb_00005il2

5K7M | pdb_00005k7m

5K7U | pdb_00005k7u

5K7W | pdb_00005k7w

5L6D | pdb_00005l6d

5L6E | pdb_00005l6e

5TEY | pdb_00005tey

5YZ9 | pdb_00005yz9

6B91 | pdb_00006b91

6B92 | pdb_00006b92

6DU4 | pdb_00006du4

6DU5 | pdb_00006du5

6GFK | pdb_00006gfk

6GFN | pdb_00006gfn

6GT5 | pdb_00006gt5

6M1U | pdb_00006m1u

6TTP | pdb_00006ttp

6TTT | pdb_00006ttt

6TTV | pdb_00006ttv

6TTW | pdb_00006ttw

6TTX | pdb_00006ttx

6TU1 | pdb_00006tu1