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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "CDHE"

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Search Summary

This query matches 15 Structures.

Refinements

Structure Determination Methodology

experimental (15)

Scientific Name of Source Organism

	Homo sapiens (15)
	Listeria monocytogenes EGD-e (7)
	Mus musculus (4)
	Saccharomyces cerevisiae S288C (1)

Taxonomy

	Eukaryota (15)
	Bacteria (7)

Experimental Method

X-RAY DIFFRACTION (15)

Polymer Entity Type

Protein (15)

Refinement Resolution (Å)

	1.5 - 2.0 (8)
	2.0 - 2.5 (5)
	2.5 - 3.0 (2)

Release Date

	2005 - 2009 (9)
	2015 - 2019 (3)
	2020 - 2024 (3)

Symmetry Type

	Asymmetric (10)
	Cyclic (5)

SCOP Classification

	All beta proteins (13)
	Artifacts (8)
	Alpha and beta proteins (a/b) (6)
	Alpha and beta proteins (a+b) (2)

AllSelected

1 to 15 of 15 Structures

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2O72 \| pdb_00002o72	Download File View File

Crystal Structure Analysis of human E-cadherin (1-213)

Parisini, E., Wang, J.-H.

(2007) J Mol Biology 373: 401-411

Released	2007-10-09
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Epithelial-cadherin (protein)
Unique Ligands	CA

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2OMT \| pdb_00002omt	Download File View File

Crystal structure of InlA G194S+S/hEC1 complex

Wollert, T., Heinz, D.W., Schubert, W.D.

(2007) Proc Natl Acad Sci U S A 104: 13960-13965

Released	2007-08-28
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens Listeria monocytogenes EGD-e
Macromolecule	Epithelial-cadherin; E-Cad/CTF1 (protein) Internalin-A (protein)
Unique Ligands	CA, CL

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2OMU \| pdb_00002omu	Download File View File

Crystal structure of InlA G194S+S Y369S/hEC1 complex

Wollert, T., Heinz, D.W., Schubert, W.D.

(2007) Proc Natl Acad Sci U S A 104: 13960-13965

Released	2007-08-28
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens Listeria monocytogenes EGD-e
Macromolecule	Epithelial-cadherin (protein) Internalin-A (protein)
Unique Ligands	CA, CL

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2OMV \| pdb_00002omv	Download File View File

Crystal structure of InlA S192N Y369S/hEC1 complex

Wollert, T., Heinz, D.W., Schubert, W.D.

(2007) Cell 129: 891-902

Released	2007-06-05
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens Listeria monocytogenes EGD-e
Macromolecule	Epithelial-cadherin (protein) Internalin-A (protein)
Unique Ligands	CA, CL

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2OMX \| pdb_00002omx	Download File View File

Crystal structure of InlA S192N G194S+S/hEC1 complex

Wollert, T., Heinz, D.W., Schubert, W.D.

(2007) Proc Natl Acad Sci U S A 104: 13960-13965

Released	2007-08-28
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens Listeria monocytogenes EGD-e
Macromolecule	Epithelial-cadherin (protein) Internalin-A (protein)
Unique Ligands	CA, CL

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2OMY \| pdb_00002omy	Download File View File

Crystal structure of InlA S192N/hEC1 complex

Wollert, T., Heinz, D.W., Schubert, W.D.

(2007) Cell 129: 891-902

Released	2007-06-05
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens Listeria monocytogenes EGD-e
Macromolecule	Epithelial-cadherin (protein) Internalin-A (protein)
Unique Ligands	CA, CL

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2OMZ \| pdb_00002omz	Download File View File

Crystal structure of InlA Y369A/hEC1 complex

Wollert, T., Heinz, D.W., Schubert, W.D.

(2007) Proc Natl Acad Sci U S A 104: 13960-13965

Released	2007-08-28
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens Listeria monocytogenes EGD-e
Macromolecule	Epithelial-cadherin (protein) Internalin-A (protein)

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3FF7 \| pdb_00003ff7	Download File View File

Structure of NK cell receptor KLRG1 bound to E-cadherin

Li, Y., Mariuzza, R.A.

(2009) Immunity 31: 35-46

Released	2009-07-28
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Epithelial cadherin (protein) Killer cell lectin-like receptor subfamily G member 1 (protein)
Unique Ligands	ACY

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3FF8 \| pdb_00003ff8	Download File View File

Structure of NK cell receptor KLRG1 bound to E-cadherin

Li, Y., Mariuzza, R.A.

(2009) Immunity 31: 35-46

Released	2009-07-28
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Epithelial cadherin (protein) Killer cell lectin-like receptor subfamily G member 1 (protein)
Unique Ligands	CA

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4ZT1 \| pdb_00004zt1	Download File View File

Crystal structure of human E-Cadherin (residues 3-213) in x-dimer conformation

Nardone, V., Lucarelli, A.P., Dalle Vedove, A., Parisini, E.

(2016) J Med Chem 59: 5089-5094

Released	2016-06-01
Method	X-RAY DIFFRACTION 1.92 Å
Organisms	Homo sapiens
Macromolecule	Cadherin-1 (protein)
Unique Ligands	CA

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4ZTE \| pdb_00004zte	Download File View File

Crystal structure of human E-Cadherin (residues 3-213) in complex with a peptidomimetic inhibitor

Nardone, V., Lucarelli, A.P., Dalle Vedove, A., Parisini, E.

(2016) J Med Chem 59: 5089-5094

Released	2016-06-01
Method	X-RAY DIFFRACTION 2.13 Å
Organisms	Homo sapiens
Macromolecule	Cadherin-1 (protein)
Unique Ligands	4RL, CA

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6CXY \| pdb_00006cxy	Download File View File

Crystal Structure of Human E-cadherin bound by mouse monoclonal antibody Fab mAb-1_19A11

Seattle Structural Genomics Center for Infectious Disease (SSGCID)

To be published

Released	2019-04-10
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Cadherin-1 (protein) Heavy chain (protein) Light Chain (protein)
Unique Ligands	CA, EDO, PG4

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6VEL \| pdb_00006vel	Download File View File

Crystal Structure of Human E-cadherin bound by mouse monoclonal antibody 66E8Fab

Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

(2022) PNAS Nexus 1: pgac163-pgac163

Released	2020-01-29
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Homo sapiens Mus musculus Saccharomyces cerevisiae S288C
Macromolecule	66E8 Fab Heavy Chain (protein) 66E8 Fab Light Chain (protein) Ubiquitin-like protein SMT3,Cadherin-1 (protein)
Unique Ligands	CA, SO4

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7STZ \| pdb_00007stz	Download File View File

Crystal Structure of Human E-cadherin EC1-5 bound by mouse monoclonal antibody Fab mAb-1_19A11

Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

(2022) PNAS Nexus 1: pgac163-pgac163

Released	2022-01-26
Method	X-RAY DIFFRACTION 2.95 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Cadherin-1 (protein) mAb-1_19A11 Heavy Chain (protein) mAb-1_19A11 Light Chain (protein)
Unique Ligands	BMA, CA, EDO, MAN, NAG, PG4

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8H62 \| pdb_00008h62	Download File View File

Crystal structure of Internalin A from Listeria monocytogenes with human E-cadherin EC12

Caaveiro, J.M.M., Nagatoish, S., Tsumoto, K.

(2023) J Biological Chem 299: 105254-105254

Released	2023-10-04
Method	X-RAY DIFFRACTION 1.91 Å
Organisms	Homo sapiens Listeria monocytogenes EGD-e
Macromolecule	Cadherin-1 (protein) Internalin A (protein)
Unique Ligands	ACT, CA

1 to 15 of 15 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

2O72 | pdb_00002o72

Crystal Structure Analysis of human E-cadherin (1-213)

2OMT | pdb_00002omt

Crystal structure of InlA G194S+S/hEC1 complex

2OMU | pdb_00002omu

Crystal structure of InlA G194S+S Y369S/hEC1 complex

2OMV | pdb_00002omv

Crystal structure of InlA S192N Y369S/hEC1 complex

2OMX | pdb_00002omx

Crystal structure of InlA S192N G194S+S/hEC1 complex

2OMY | pdb_00002omy

Crystal structure of InlA S192N/hEC1 complex

2OMZ | pdb_00002omz

Crystal structure of InlA Y369A/hEC1 complex

3FF7 | pdb_00003ff7

Structure of NK cell receptor KLRG1 bound to E-cadherin

3FF8 | pdb_00003ff8

Structure of NK cell receptor KLRG1 bound to E-cadherin

4ZT1 | pdb_00004zt1

Crystal structure of human E-Cadherin (residues 3-213) in x-dimer conformation

4ZTE | pdb_00004zte

Crystal structure of human E-Cadherin (residues 3-213) in complex with a peptidomimetic inhibitor

6CXY | pdb_00006cxy

Crystal Structure of Human E-cadherin bound by mouse monoclonal antibody Fab mAb-1_19A11

6VEL | pdb_00006vel

Crystal Structure of Human E-cadherin bound by mouse monoclonal antibody 66E8Fab

7STZ | pdb_00007stz

Crystal Structure of Human E-cadherin EC1-5 bound by mouse monoclonal antibody Fab mAb-1_19A11

8H62 | pdb_00008h62

Crystal structure of Internalin A from Listeria monocytogenes with human E-cadherin EC12

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Symmetry Type

SCOP Classification

2O72 | pdb_00002o72

2OMT | pdb_00002omt

2OMU | pdb_00002omu

2OMV | pdb_00002omv

2OMX | pdb_00002omx

2OMY | pdb_00002omy

2OMZ | pdb_00002omz

3FF7 | pdb_00003ff7

3FF8 | pdb_00003ff8

4ZT1 | pdb_00004zt1

4ZTE | pdb_00004zte

6CXY | pdb_00006cxy

6VEL | pdb_00006vel

7STZ | pdb_00007stz

8H62 | pdb_00008h62