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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "FIP1"

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Search Summary

This query matches 14 Structures.

Refinements

Structure Determination Methodology

experimental (14)

Scientific Name of Source Organism

	Arabidopsis thaliana (11)
	Homo sapiens (2)
	Saccharomyces cerevisiae (1)
	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (1)

Taxonomy

	Eukaryota (14)
	Eukaryota (eukaryotes) (1)

Experimental Method

X-RAY DIFFRACTION (14)

Polymer Entity Type

Protein (14)

Refinement Resolution (Å)

	1.5 - 2.0 (10)
	2.0 - 2.5 (3)
	2.5 - 3.0 (1)

Release Date

	2005 - 2009 (1)
	2015 - 2019 (11)
	2020 - 2024 (2)

Enzyme Classification Name

	Ligases (10)
	Transferases (12)

Symmetry Type

	Asymmetric (13)
	Cyclic (1)

SCOP Classification

	All alpha proteins (12)
	Alpha and beta proteins (a/b) (11)
	Alpha and beta proteins (a+b) (1)
	Artifacts (1)

AllSelected

1 to 14 of 14 Structures

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3C66 \| pdb_00003c66	Download File View File

Yeast poly(A) polymerase in complex with Fip1 residues 80-105

Bohm, A., Meinke, G.

(2008) Biochemistry 47: 6859-6869

Released	2008-05-20
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Saccharomyces cerevisiae Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Macromolecule	Poly(A) polymerase (protein) Pre-mRNA polyadenylation factor FIP1 (protein)
Unique Ligands	GOL, MES

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5ECH \| pdb_00005ech	Download File View File

Crystal Structure of FIN219-FIP1 complex with JA and ATP

Chen, C.Y., Cheng, Y.S.

(2017) Proc Natl Acad Sci U S A 114: E1815-E1824

Released	2016-11-02
Method	X-RAY DIFFRACTION 2.14 Å
Organisms	Arabidopsis thaliana
Macromolecule	Glutathione S-transferase U20 (protein) Jasmonic acid-amido synthetase JAR1 (protein)
Unique Ligands	ATP, GSH, JAA

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5ECI \| pdb_00005eci	Download File View File

Crystal Structure of FIN219-FIP1 complex with JA, ATP and Mg

Chen, C.Y., Cheng, Y.S.

(2017) Proc Natl Acad Sci U S A 114: E1815-E1824

Released	2016-11-02
Method	X-RAY DIFFRACTION 1.56 Å
Organisms	Arabidopsis thaliana
Macromolecule	Glutathione S-transferase U20 (protein) Jasmonic acid-amido synthetase JAR1 (protein)
Unique Ligands	ATP, GSH, JAA, MG

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5ECK \| pdb_00005eck	Download File View File

Crystal Structure of FIN219-FIP1 complex with JA, Ile and ATP

Chen, C.Y., Cheng, Y.S.

(2017) Proc Natl Acad Sci U S A 114: E1815-E1824

Released	2016-11-02
Method	X-RAY DIFFRACTION 1.54 Å
Organisms	Arabidopsis thaliana
Macromolecule	Glutathione S-transferase U20 (protein) Jasmonic acid-amido synthetase JAR1 (protein)
Unique Ligands	ATP, GSH, ILE, JAA

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5ECL \| pdb_00005ecl	Download File View File

Crystal Structure of FIN219-FIP1 complex with JA, Ile and Mg

Chen, C.Y., Cheng, Y.S.

(2017) Proc Natl Acad Sci U S A 114: E1815-E1824

Released	2016-11-02
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Arabidopsis thaliana
Macromolecule	Glutathione S-transferase U20 (protein) Jasmonic acid-amido synthetase JAR1 (protein)
Unique Ligands	GSH, ILE, JAA, MG

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5ECM \| pdb_00005ecm	Download File View File

Crystal Structure of FIN219-FIP1 complex with JA and Leu

Chen, C.Y., Cheng, Y.S.

(2017) Proc Natl Acad Sci U S A 114: E1815-E1824

Released	2016-11-02
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Arabidopsis thaliana
Macromolecule	Glutathione S-transferase U20 (protein) Jasmonic acid-amido synthetase JAR1 (protein)
Unique Ligands	GSH, JAA, LEU

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5ECN \| pdb_00005ecn	Download File View File

Crystal Structure of FIN219-FIP1 complex with JA, Leu and ATP

Chen, C.Y., Cheng, Y.S.

(2017) Proc Natl Acad Sci U S A 114: E1815-E1824

Released	2016-11-02
Method	X-RAY DIFFRACTION 1.72 Å
Organisms	Arabidopsis thaliana
Macromolecule	Glutathione S-transferase U20 (protein) Jasmonic acid-amido synthetase JAR1 (protein)
Unique Ligands	ATP, GSH, JAA, LEU

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5ECO \| pdb_00005eco	Download File View File

Crystal Structure of FIN219-FIP1 complex with JA, Leu and Mg

Chen, C.Y., Cheng, Y.S.

(2017) Proc Natl Acad Sci U S A 114: E1815-E1824

Released	2016-11-02
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Arabidopsis thaliana
Macromolecule	Glutathione S-transferase U20 (protein) Jasmonic acid-amido synthetase JAR1 (protein)
Unique Ligands	GSH, JAA, LEU, MG

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5ECP \| pdb_00005ecp	Download File View File

Crystal Structure of FIN219-FIP1 complex with JA, MET and ATP

Chen, C.Y., Cheng, Y.S.

(2017) Proc Natl Acad Sci U S A 114: E1815-E1824

Released	2016-11-02
Method	X-RAY DIFFRACTION 2.25001563827 Å
Organisms	Arabidopsis thaliana
Macromolecule	Glutathione S-transferase U20 (protein) Jasmonic acid-amido synthetase JAR1 (protein)
Unique Ligands	ATP, GSH, JAA, MET

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5ECQ \| pdb_00005ecq	Download File View File

Crystal Structure of FIN219-FIP1 complex with JA, VAL and ATP

Chen, C.Y., Cheng, Y.S.

(2017) Proc Natl Acad Sci U S A 114: E1815-E1824

Released	2016-11-02
Method	X-RAY DIFFRACTION 1.66 Å
Organisms	Arabidopsis thaliana
Macromolecule	Glutathione S-transferase U20 (protein) Jasmonic acid-amido synthetase JAR1 (protein)
Unique Ligands	ATP, GSH, JAA, VAL

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5ECR \| pdb_00005ecr	Download File View File

Crystal Structure of FIN219-FIP1 complex with JA, VAL and Mg

Chen, C.Y., Cheng, Y.S.

(2017) Proc Natl Acad Sci U S A 114: E1815-E1824

Released	2016-11-02
Method	X-RAY DIFFRACTION 1.72 Å
Organisms	Arabidopsis thaliana
Macromolecule	Glutathione S-transferase U20 (protein) Jasmonic acid-amido synthetase JAR1 (protein)
Unique Ligands	GSH, JAA, MG, VAL

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5ECS \| pdb_00005ecs	Download File View File

Crystal Structure of FIP1 with GSH

Chen, C.Y., Cheng, Y.S.

(2017) Proc Natl Acad Sci U S A 114: E1815-E1824

Released	2016-11-02
Method	X-RAY DIFFRACTION 1.65000262305 Å
Organisms	Arabidopsis thaliana
Macromolecule	Glutathione S-transferase U20 (protein)
Unique Ligands	GSH

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7K95 \| pdb_00007k95	Download File View File

Crystal structure of human CPSF30 in complex with hFip1

Hamilton, K., Tong, L.

(2020) Genes Dev 34: 1753-1761

Released	2020-11-11
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Isoform 2 of Cleavage and polyadenylation specificity factor subunit 4 (protein) Pre-mRNA 3'-end-processing factor FIP1 (protein)
Unique Ligands	ZN

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7ZYH \| pdb_00007zyh	Download File View File

Crystal structure of human CPSF30 in complex with hFip1

Muckenfuss, L.M., Jinek, M., Migenda Herranz, A.C., Clerici, M.

(2022) Elife 11:

Released	2022-09-14
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	Cleavage and polyadenylation specificity factor subunit 4 (protein) Isoform 4 of Pre-mRNA 3'-end-processing factor FIP1 (protein)
Unique Ligands	ZN

1 to 14 of 14 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

3C66 | pdb_00003c66

Yeast poly(A) polymerase in complex with Fip1 residues 80-105

5ECH | pdb_00005ech

Crystal Structure of FIN219-FIP1 complex with JA and ATP

5ECI | pdb_00005eci

Crystal Structure of FIN219-FIP1 complex with JA, ATP and Mg

5ECK | pdb_00005eck

Crystal Structure of FIN219-FIP1 complex with JA, Ile and ATP

5ECL | pdb_00005ecl

Crystal Structure of FIN219-FIP1 complex with JA, Ile and Mg

5ECM | pdb_00005ecm

Crystal Structure of FIN219-FIP1 complex with JA and Leu

5ECN | pdb_00005ecn

Crystal Structure of FIN219-FIP1 complex with JA, Leu and ATP

5ECO | pdb_00005eco

Crystal Structure of FIN219-FIP1 complex with JA, Leu and Mg

5ECP | pdb_00005ecp

Crystal Structure of FIN219-FIP1 complex with JA, MET and ATP

5ECQ | pdb_00005ecq

Crystal Structure of FIN219-FIP1 complex with JA, VAL and ATP

5ECR | pdb_00005ecr

Crystal Structure of FIN219-FIP1 complex with JA, VAL and Mg

5ECS | pdb_00005ecs

Crystal Structure of FIP1 with GSH

7K95 | pdb_00007k95

Crystal structure of human CPSF30 in complex with hFip1

7ZYH | pdb_00007zyh

Crystal structure of human CPSF30 in complex with hFip1

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

3C66 | pdb_00003c66

5ECH | pdb_00005ech

5ECI | pdb_00005eci

5ECK | pdb_00005eck

5ECL | pdb_00005ecl

5ECM | pdb_00005ecm

5ECN | pdb_00005ecn

5ECO | pdb_00005eco

5ECP | pdb_00005ecp

5ECQ | pdb_00005ecq

5ECR | pdb_00005ecr

5ECS | pdb_00005ecs

7K95 | pdb_00007k95

7ZYH | pdb_00007zyh