1JLW | pdb_00001jlw

Anopheles dirus species B glutathione S-transferases 1-4


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free: 
    0.271 (Depositor), 0.269 (DCC) 
  • R-Value Work: 
    0.223 (Depositor), 0.223 (DCC) 
  • R-Value Observed: 
    0.223 (Depositor) 

Starting Model: other
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wwPDB Validation 3D Report Full Report

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This is version 1.4 of the entry. See complete history

Literature

The crystal structures of glutathione S-transferases isozymes 1-3 and 1-4 from Anopheles dirus species B.

Oakley, A.J.Harnnoi, T.Udomsinprasert, R.Jirajaroenrat, K.Ketterman, A.J.Wilce, M.C.

(2001) Protein Sci 10: 2176-2185

  • DOI: https://doi.org/10.1110/ps.ps.21201
  • Primary Citation Related Structures: 
    1JLV, 1JLW

  • PubMed Abstract: 

    Glutathione S-transferases (GSTs) are dimeric proteins that play an important role in cellular detoxification. Four GSTs from the mosquito Anopheles dirus species B (Ad), an important malaria vector in South East Asia, are produced by alternate splicing of a single transcription product and were previously shown to have detoxifying activity towards pesticides such as DDT. We have determined the crystal structures for two of these alternatively spliced proteins, AdGST1-3 (complexed with glutathione) and AdGST1-4 (apo form), at 1.75 and 2.45 A resolution, respectively. These GST isozymes show differences from the related GST from the Australian sheep blowfly Lucilia cuprina; in particular, the presence of a C-terminal helix forming part of the active site. This helix causes the active site of the Anopheles GSTs to be enclosed. The glutathione-binding helix alpha2 and flanking residues are disordered in the AdGST1-4 (apo) structure, yet ordered in the AdGST1-3 (GSH-bound) structure, suggesting that insect GSTs operate with an induced fit mechanism similar to that found in the plant phi- and human pi-class GSTs. Despite the high overall sequence identities, the active site residues of AdGST1-4 and AdGST1-3 have different conformations.


  • Organizational Affiliation
    • Department of Pharmacology/Crystallography Centre, University of Western Australia, Crawley 6009, Australia.

Macromolecule Content 

  • Total Structure Weight: 50 kDa 
  • Atom Count: 3,532 
  • Modeled Residue Count: 434 
  • Deposited Residue Count: 438 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
glutathione transferase GST1-4
A, B
219Anopheles cracensMutation(s): 0 
EC: 2.5.1.18
UniProt
Find proteins for Q7KIF1 (Anopheles cracens)
Explore Q7KIF1 
Go to UniProtKB:  Q7KIF1
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ7KIF1
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free:  0.271 (Depositor), 0.269 (DCC) 
  • R-Value Work:  0.223 (Depositor), 0.223 (DCC) 
  • R-Value Observed: 0.223 (Depositor) 
Space Group: P 32 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 49.44α = 90
b = 49.44β = 90
c = 271.81γ = 120
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
MOLREPphasing
CNSrefinement

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2002-07-16
    Type: Initial release
  • Version 1.1: 2008-04-27
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2024-02-07
    Changes: Data collection, Database references
  • Version 1.4: 2024-04-03
    Changes: Refinement description