1LQL | pdb_00001lql

Crystal structure of OsmC like protein from Mycoplasma pneumoniae

PDB DOI: https://doi.org/10.2210/pdb1LQL/pdb

Classification: UNKNOWN FUNCTION
Organism(s): Mycoplasmoides pneumoniae
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2002-05-10 Released: 2003-08-05
Deposition Author(s): Choi, I.-G., Shin, D.H., Brandsen, J., Jancarik, J., Kim, R., Yokota, H., Kim, S.-H., Berkeley Structural Genomics Center (BSGC)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.85 Å
R-Value Free:
0.276 (Depositor)
R-Value Work:
0.217 (Depositor)
R-Value Observed:
0.219 (Depositor)

wwPDB Validation 3D Report Full Report

Validation slider image for 1LQL

This is version 1.3 of the entry. See complete history.

Literature

Crystal structure of a stress inducible protein from Mycoplasma pneumoniae at 2.85 A resolution

Choi, I.-G., Shin, D.H., Brandsen, J., Jancarik, J., Busso, D., Yokota, H., Kim, R., Kim, S.-H.

(2003) J Struct Funct Genomics 4: 31-34

PubMed: 12943365 Search on PubMed
DOI: https://doi.org/10.1023/a:1024625122089
Primary Citation Related Structures:
1LQL

Organizational Affiliation

Department of Chemistry, University of California, Berkeley, California 94720-5230, USA.

Macromolecule Content

Total Structure Weight: 184.74 kDa
Atom Count: 11,257
Modeled Residue Count: 1,432
Deposited Residue Count: 1,660
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
osmotical inducible protein C like family	A, B, C, D, E A, B, C, D, E, F, G, H, I, J	166	Mycoplasmoides pneumoniae	Mutation(s): 0 EC: 1.11.1
UniProt
Find proteins for P75170 (Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)) Explore P75170 Go to UniProtKB: P75170
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P75170
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.85 Å
R-Value Free: 0.276 (Depositor)
R-Value Work: 0.217 (Depositor)
R-Value Observed: 0.219 (Depositor)

Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 66.36	α = 90
b = 95.6	β = 90
c = 308.48	γ = 90

Software Package:

Software Name	Purpose
HKL-2000	data collection
SCALEPACK	data scaling
SHARP	phasing
CNS	refinement
HKL-2000	data reduction

Structure Validation

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Entry History

Deposition Data

Released Date: 2003-08-05

Deposition Author(s):

Berkeley Structural Genomics Center (BSGC)

Revision History (Full details and data files)

Version 1.0: 2003-08-05
Type: Initial release
Version 1.1: 2008-04-28
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2024-11-20
Changes: Data collection, Database references, Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.