1USM | pdb_00001usm

DCOH, A BIFUNCTIONAL PROTEIN-BINDING TRANSCRIPTIONAL COACTIVATOR, PRO9LEU MUTANT

PDB DOI: https://doi.org/10.2210/pdb1USM/pdb

Classification: TRANSCRIPTIONAL STIMULATOR
Organism(s): Thermus thermophilus HB8
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2003-11-26 Released: 2003-11-27
Deposition Author(s): Tahirov, T.H., Inagaki, E.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.20 Å
R-Value Free:
0.228 (Depositor)
R-Value Work:
0.215 (Depositor), 0.222 (DCC)
R-Value Observed:
0.215 (Depositor)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

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This is version 1.4 of the entry. See complete history.

Literature

Crystal Structure of Transcriptional Coactivator DCoH from Thermus Thermophilus

Tahirov, T.H., Inagaki, E.

To be published.

Macromolecule Content

Total Structure Weight: 9.51 kDa
Atom Count: 808
Modeled Residue Count: 77
Deposited Residue Count: 80
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
HEPATOCYTE NUCLEAR FACTOR 1-ALPHA	A	80	Thermus thermophilus HB8	Mutation(s): 0 EC: 4.2.1.96
UniProt
Find proteins for P83819 (Thermus thermophilus) Explore P83819 Go to UniProtKB: P83819
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P83819
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.20 Å
R-Value Free: 0.228 (Depositor)
R-Value Work: 0.215 (Depositor), 0.222 (DCC)
R-Value Observed: 0.215 (Depositor)

Space Group: I 4 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 55.625	α = 90
b = 55.625	β = 90
c = 125.882	γ = 90

Software Package:

Software Name	Purpose
CNS	refinement
HKL-2000	data reduction
HKL-2000	data scaling

Structure Validation

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Entry History

Deposition Data

Released Date: 2003-11-27

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2003-11-27
Type: Initial release
Version 1.1: 2011-05-08
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2019-05-08
Changes: Data collection, Experimental preparation, Other
Version 1.4: 2023-12-13
Changes: Data collection, Database references, Other, Refinement description

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.