Kirromycin Defines a Specific Domain Arrangement of Elongation Factor EF-TU
Nielsen, R.C., Kristensen, O., Kjeldgaard, M., Thirup, S., Nissen, P.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
ELONGATION FACTOR TU | 393 | Escherichia coli BL21 | Mutation(s): 0  EC: 3.6.1.48 | ||
UniProt | |||||
Find proteins for P0CE48 (Escherichia coli (strain K12)) Explore P0CE48  Go to UniProtKB:  P0CE48 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0CE48 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | Organism | Image | |
TRANSFER-RNA, PHE | 77 | Saccharomyces cerevisiae | |||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
KIR Query on KIR | D [auth A] | KIRROMYCIN C43 H60 N2 O12 HMSYAPGFKGSXAJ-PAHGNTJYSA-N | |||
GNP Query on GNP | E [auth A] | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER C10 H17 N6 O13 P3 UQABYHGXWYXDTK-UUOKFMHZSA-N | |||
MG Query on MG | F [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
PHA Query on PHA | B | L-PEPTIDE LINKING | C9 H11 N O | PHE |
Entity ID: 3 | |||||
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ID | Chains | Name | Type/Class | 2D Diagram | 3D Interactions |
PRD_900003 Query on PRD_900003 | C | sucrose | Oligosaccharide / Nutrient |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 196.41 | α = 90 |
b = 196.41 | β = 90 |
c = 196.41 | γ = 90 |
Software Name | Purpose |
---|---|
CNS | refinement |
DENZO | data reduction |
Agrovata | data scaling |
AMoRE | phasing |