2FSQ | pdb_00002fsq

Crystal Structure of the Conserved Protein of Unknown Function ATU0111 from Agrobacterium tumefaciens str. C58

• PDB DOI: https://doi.org/10.2210/pdb2FSQ/pdb

• Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
• Organism(s): Agrobacterium fabrum str. C58
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): Yes 


• Deposited: 2006-01-23 Released: 2006-03-07 
• Deposition Author(s): Kim, Y., Joachimiak, A., Xu, X., Zheng, H., Edwards, A., Savchenko, A., Midwest Center for Structural Genomics (MCSG)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.40 Å
• R-Value Free: 
  0.200 (Depositor), 0.198 (DCC) 
• R-Value Work: 
  0.154 (Depositor), 0.151 (DCC) 
• R-Value Observed: 
  0.158 (Depositor) 

Literature

Crystal Structure of the Conserved Hypothetical Protein Atu0111 from Agrobacterium tumefaciens str. C58

Kim, Y., Joachimiak, A., Xu, X., Zheng, H., Edwards, A., Savchenko, A.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 28.32 kDa 
• Atom Count: 2,408 
• Modeled Residue Count: 232 
• Deposited Residue Count: 243 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Atu0111 protein	A	243	Agrobacterium fabrum str. C58	Mutation(s): 9  Gene Names: atu0111
UniProt
Find proteins for A9CKP4 (Agrobacterium fabrum (strain C58 / ATCC 33970)) Explore A9CKP4  Go to UniProtKB:  A9CKP4

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ACY	B [auth A], C [auth A]	ACETIC ACID C2 H4 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-N

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.40 Å
• R-Value Free:  0.200 (Depositor), 0.198 (DCC) 
• R-Value Work:  0.154 (Depositor), 0.151 (DCC) 
• R-Value Observed: 0.158 (Depositor) 

Space Group: P 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 33.926	α = 89.7
b = 35.603	β = 79.12
c = 51.189	γ = 69.44

Software Package:

Software Name	Purpose
REFMAC	refinement
SBC-Collect	data collection
HKL-2000	data reduction
HKL-2000	data scaling
HKL-3000	phasing
MLPHARE	phasing
SHELXD	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2006-03-07 
Deposition Author(s): Kim, Y., Joachimiak, A., Xu, X., Zheng, H., Edwards, A., Savchenko, A., Midwest Center for Structural Genomics (MCSG)

Revision History  

• Version 1.0: 2006-03-07
  Type: Initial release
  
• Version 1.1: 2008-05-01
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Source and taxonomy, Version format compliance
• Version 1.3: 2024-10-30
  Changes: Data collection, Database references, Derived calculations, Structure summary