2KT0 | pdb_00002kt0

Solution structure of human stem cell transcription factor Nanog homeodomain fragment

PDB DOI: https://doi.org/10.2210/pdb2KT0/pdb
BMRB: 16680

Classification: Transcription regulation
Organism(s): Homo sapiens
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2010-01-15 Released: 2010-02-02
Deposition Author(s): Sahu, S.C., Markley, J.L., Center for Eukaryotic Structural Genomics (CESG)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: target function

wwPDB Validation 3D Report Full Report

Validation slider image for 2KT0

This is version 1.4 of the entry. See complete history.

Literature

Solution structure of human stem cell transcription factor Nanog

Sahu, S.C., Markley, J.L.

To be published.

Macromolecule Content

Total Structure Weight: 10.07 kDa
Atom Count: 706
Modeled Residue Count: 84
Deposited Residue Count: 84
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Homeobox protein NANOG	A	84	Homo sapiens	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for Q9H9S0 (Homo sapiens) Explore Q9H9S0 Go to UniProtKB: Q9H9S0
PHAROS: Q9H9S0 GTEx: ENSG00000111704
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q9H9S0
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: target function

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2010-02-02

Deposition Author(s):

Center for Eukaryotic Structural Genomics (CESG)

Revision History (Full details and data files)

Version 1.0: 2010-02-02
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2020-02-26
Changes: Database references, Derived calculations, Other
Version 1.3: 2023-06-14
Changes: Database references, Other
Version 1.4: 2024-05-08
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.