2MM8 | pdb_00002mm8

Structural and biochemical characterization of Jaburetox

PDB DOI: https://doi.org/10.2210/pdb2MM8/pdb
BMRB: 19830

Classification: HYDROLASE
Organism(s): Canavalia ensiformis
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2014-03-12 Released: 2015-01-28
Deposition Author(s): Dobrovolska, O., Lopez, F., Ciurli, S., Zambelli, B., Carlini, C.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 5
Conformers Submitted: 5
Selection Criteria: all calculated structures submitted

wwPDB Validation 3D Report Full Report

Validation slider image for 2MM8

This is version 1.2 of the entry. See complete history.

Literature

1H, 13C, 15N resonance assignments of reduced Jaburetox

Dobrovolska, O., Lopez, F., Zambelli, B., Carlini, C., Ciurli, S.

To be published.

Macromolecule Content

Total Structure Weight: 10.97 kDa
Atom Count: 689
Modeled Residue Count: 90
Deposited Residue Count: 99
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Urease	A	99	Canavalia ensiformis	Mutation(s): 0 Gene Names: JBURE-II EC: 3.5.1.5
UniProt
Find proteins for E6Y5X0 (Canavalia ensiformis) Explore E6Y5X0 Go to UniProtKB: E6Y5X0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	E6Y5X0
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 5
Conformers Submitted: 5
Selection Criteria: all calculated structures submitted

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2015-01-28

Deposition Author(s):

Dobrovolska, O.

Revision History (Full details and data files)

Version 1.0: 2015-01-28
Type: Initial release
Version 1.1: 2023-06-14
Changes: Data collection, Database references, Other
Version 1.2: 2024-05-15
Changes: Data collection, Database references

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.