Mapping Binding Pocket Volume: Potential Applications towards Ligand Design and Selectivity
Arora, N., Williams, C., Delano, W., Will, D., Kuglstatter, A.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Mitogen-activated protein kinase 14 | 372 | Homo sapiens | Mutation(s): 1 Gene Names: CSBP, CSBP1, CSBP2, CSPB1, MAPK14, MXI2 EC: 2.7.11.24 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q16539 (Homo sapiens) Explore Q16539 Go to UniProtKB: Q16539 | |||||
PHAROS: Q16539 GTEx: ENSG00000112062 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q16539 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
FKO Query on FKO | B [auth A] | 3-(2-chlorophenyl)-6-(2-fluorophenoxy)-2H-indazole C19 H12 Cl F N2 O QDPZIIDGFJHLRY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 45.288 | α = 90 |
b = 86.613 | β = 90 |
c = 123.396 | γ = 90 |
Software Name | Purpose |
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ADSC | data collection |
DM | model building |
REFMAC | refinement |
MOSFLM | data reduction |
SCALA | data scaling |
DM | phasing |