The Crystal Structure of an Isochorismatase-like Hydrolase from Alkaliphilus metalliredigens to 2.3A
Stein, A.J., Xu, X., Cui, H., Ng, J., Edwards, A., Savchenko, A., Joachimiak, A.To be published.
Experimental Data Snapshot
wwPDB Validation 3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Isochorismatase hydrolase | 204 | Alkaliphilus metalliredigens QYMF | Mutation(s): 0 Gene Names: Amet_4583 | ![]() | |
UniProt | |||||
Find proteins for A6TWT6 (Alkaliphilus metalliredigens (strain QYMF)) Explore A6TWT6 Go to UniProtKB: A6TWT6 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A6TWT6 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NA Query on NA | J [auth A], M [auth B], P [auth E], Q [auth F], R [auth G] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N | |||
NH4 Query on NH4 | I [auth A] K [auth C] L [auth B] N [auth D] O [auth E] | AMMONIUM ION H4 N QGZKDVFQNNGYKY-UHFFFAOYSA-O |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A B [auth C] C [auth B] D E | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 85.651 | α = 90 |
b = 105.425 | β = 103.9 |
c = 106.267 | γ = 90 |
Software Name | Purpose |
---|---|
DENZO | data reduction |
SCALEPACK | data scaling |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
SBC-Collect | data collection |
HKL-3000 | phasing |
SHELX | phasing |
MLPHARE | phasing |
DM | phasing |
ARP/wARP | model building |
Coot | model building |