3L8P | pdb_00003l8p

Crystal structure of cytoplasmic kinase domain of Tie2 complexed with inhibitor CEP11207

• PDB DOI: https://doi.org/10.2210/pdb3L8P/pdb

• Classification: TRANSFERASE
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2010-01-03 Released: 2010-10-06 
• Deposition Author(s): Fedorov, A.A., Fedorov, E.V., Pauletti, D., Meyer, S.L., Hudkins, R.L., Almo, S.C.

---

Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.40 Å
• R-Value Free: 
  0.265 (Depositor), 0.266 (DCC) 
• R-Value Work: 
  0.238 (Depositor), 0.237 (DCC) 
• R-Value Observed: 
  0.238 (Depositor) 

Starting Model: experimental

Literature

Crystal structure of cytoplasmic kinase domain of Tie2 complexed with inhibitor CEP11207

Fedorov, A.A., Fedorov, E.V., Pauletti, D., Meyer, S.L., Hudkins, R.L., Almo, S.C.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 36.71 kDa 
• Atom Count: 2,421 
• Modeled Residue Count: 292 
• Deposited Residue Count: 317 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Angiopoietin-1 receptor	A	317	Homo sapiens	Mutation(s): 0  Gene Names: TEK, TIE2 EC: 2.7.10.1
UniProt & NIH Common Fund Data Resources
Find proteins for Q02763 (Homo sapiens) Explore Q02763  Go to UniProtKB:  Q02763
PHAROS:  Q02763 GTEx:  ENSG00000120156

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
0CE	B [auth A]	2-methyl-11-(1-methylethyl)-8-[(2S)-tetrahydro-2H-pyran-2-yl]-2,11,12,13-tetrahydro-4H-indazolo[5,4-a]pyrrolo[3,4-c]carbazol-4-one C28 H28 N4 O2 JPKZOLAMWIKKME-QHCPKHFHSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.40 Å
• R-Value Free:  0.265 (Depositor), 0.266 (DCC) 
• R-Value Work:  0.238 (Depositor), 0.237 (DCC) 
• R-Value Observed: 0.238 (Depositor) 

Space Group: P 4₂ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 85.602	α = 90
b = 85.602	β = 90
c = 107.344	γ = 90

Software Package:

Software Name	Purpose
ADSC	data collection
EPMR	phasing
CNS	refinement
DENZO	data reduction
SCALEPACK	data scaling

Structure Validation

Entry History 

Deposition Data

• Released Date: 2010-10-06 
Deposition Author(s): Fedorov, A.A., Fedorov, E.V., Pauletti, D., Meyer, S.L., Hudkins, R.L., Almo, S.C.

Revision History  

• Version 1.0: 2010-10-06
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2023-09-06
  Changes: Data collection, Database references, Derived calculations, Refinement description