Complex structure of human C5a and its binding repebody
Kim, H.-S., Choi, J.M., Hwang, D.E.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
repebody | 261 | synthetic construct | Mutation(s): 0  | ||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
C5a anaphylatoxin | 75 | Homo sapiens | Mutation(s): 0  Gene Names: C5, CPAMD4 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P01031 (Homo sapiens) Explore P01031  Go to UniProtKB:  P01031 | |||||
PHAROS:  P01031 GTEx:  ENSG00000106804  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P01031 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
1PE Query on 1PE | E [auth A], I [auth B] | PENTAETHYLENE GLYCOL C10 H22 O6 JLFNLZLINWHATN-UHFFFAOYSA-N | |||
SO4 Query on SO4 | F [auth A] G [auth A] H [auth A] J [auth B] K [auth C] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 55.837 | α = 90 |
b = 87.553 | β = 90 |
c = 188.392 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
PHASER | phasing |