Nucleotide binding to variants of the HSP70-NBD.
Narayanan, D., Pflug, A., Christopeit, T., Kyomuhendo, P., Engh, R.A.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Heat shock 70 kDa protein 1A | 388 | Homo sapiens | Mutation(s): 1  Gene Names: HSPA1A, HSPA1, HSX70 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P0DMV8 (Homo sapiens) Explore P0DMV8  Go to UniProtKB:  P0DMV8 | |||||
PHAROS:  P0DMV8 GTEx:  ENSG00000204389  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0DMV8 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 5 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ADP Query on ADP | B [auth A] | ADENOSINE-5'-DIPHOSPHATE C10 H15 N5 O10 P2 XTWYTFMLZFPYCI-KQYNXXCUSA-N | |||
EPE Query on EPE | C [auth A] | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID C8 H18 N2 O4 S JKMHFZQWWAIEOD-UHFFFAOYSA-N | |||
PO4 Query on PO4 | E [auth A] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K | |||
CL Query on CL | D [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M | |||
NA Query on NA | F [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 45.933 | α = 90 |
b = 63.21 | β = 90 |
c = 143.872 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
Coot | model building |
MOLREP | phasing |
Aimless | data scaling |
XDS | data reduction |
Funding Organization | Location | Grant Number |
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FRINAT | Norway | 191303 |