5M2D

CRYSTAL STRUCTURE 4Ac Endoglucanase-like protein from Acremonium chrysogenum

• PDB DOI: https://doi.org/10.2210/pdb5M2D/pdb

• Classification: HYDROLASE
• Organism(s): Hapsidospora chrysogenum ATCC 11550
• Expression System: Komagataella phaffii GS115
• Mutation(s): No 


• Deposited: 2016-10-12 Released: 2017-11-29 
• Deposition Author(s): Gabdulkhakov, A., Tishchenko, S.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.10 Å
• R-Value Free: 
  0.214 (Depositor), 0.210 (DCC) 
• R-Value Work: 
  0.190 (Depositor), 0.180 (DCC) 
• R-Value Observed: 
  0.191 (Depositor) 

Literature

CRYSTAL STRUCTURE 4Ac Endoglucanase-like protein from Acremonium chrysogenum

Gabdulkhakov, A., Tishchenko, S., Lisov, A.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 51.64 kDa 
• Atom Count: 3,626 
• Modelled Residue Count: 440 
• Deposited Residue Count: 470 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Endoglucanase-like protein	A, B	235	Hapsidospora chrysogenum ATCC 11550	Mutation(s): 0  Gene Names: ACRE_041060
UniProt
Find proteins for A0A086T6R4 (Hapsidospora chrysogenum (strain ATCC 11550 / CBS 779.69 / DSM 880 / IAM 14645 / JCM 23072 / IMI 49137)) Explore A0A086T6R4  Go to UniProtKB:  A0A086T6R4

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
GOL	C [auth A], D [auth B]	GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.10 Å
• R-Value Free:  0.214 (Depositor), 0.210 (DCC) 
• R-Value Work:  0.190 (Depositor), 0.180 (DCC) 
• R-Value Observed: 0.191 (Depositor) 

Space Group: I 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 72.889	α = 90
b = 49.255	β = 93.03
c = 117.552	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data reduction
XDS	data scaling
PHASER	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2017-11-29 
Deposition Author(s): Gabdulkhakov, A., Tishchenko, S.

Revision History  

• Version 1.0: 2017-11-29
  Type: Initial release
  
• Version 2.0: 2019-10-16
  Changes: Atomic model, Data collection
• Version 2.1: 2024-11-20
  Changes: Data collection, Database references, Structure summary