Rat Xanthine oxidoreductase, D428A variant, NAD bound form
Okamoto, K., Kawaguchi, Y.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Xanthine dehydrogenase/oxidase | A, B [auth F] | 1,331 | Rattus norvegicus | Mutation(s): 0  Gene Names: Xdh EC: 1.17.1.4 (PDB Primary Data), 1.17.3.2 (PDB Primary Data) | |
UniProt | |||||
Find proteins for P22985 (Rattus norvegicus) Explore P22985  Go to UniProtKB:  P22985 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P22985 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
FAD Query on FAD | G [auth A], L [auth F] | FLAVIN-ADENINE DINUCLEOTIDE C27 H33 N9 O15 P2 VWWQXMAJTJZDQX-UYBVJOGSSA-N | |||
FES Query on FES | C [auth A], D [auth A], H [auth F], I [auth F] | FE2/S2 (INORGANIC) CLUSTER Fe2 S2 NIXDOXVAJZFRNF-UHFFFAOYSA-N | |||
URC Query on URC | E [auth A], J [auth F] | URIC ACID C5 H4 N4 O3 LEHOTFFKMJEONL-UHFFFAOYSA-N | |||
BCT Query on BCT | F [auth A], K [auth F] | BICARBONATE ION C H O3 BVKZGUZCCUSVTD-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
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a = 98.717 | α = 90 |
b = 138.084 | β = 90 |
c = 222.255 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
AMoRE | phasing |
Funding Organization | Location | Grant Number |
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Japan | 15H04702 |