Download MendeleyCysteine S-nitrosylation of hGSTP1-1 by nitric oxide (NO)-releasing prodrugs
Kumari, V., Dyba, M.A., Ji, X.To be published.
6AP9
Crystal Structure of hGSTP1-1 with S-nitrosation of Cys101
- PDB DOI: https://doi.org/10.2210/pdb6AP9/pdb
- Classification: TRANSFERASE
- Organism(s): Homo sapiens
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2017-08-17 Released: 2018-08-22
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.55 Å
- R-Value Free: 0.181
- R-Value Work: 0.146
- R-Value Observed: 0.146
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Glutathione S-transferase P | 210 | Homo sapiens | Mutation(s): 0 Gene Names: GSTP1, FAEES3, GST3 EC: 2.5.1.18 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P09211 (Homo sapiens) Explore P09211 Go to UniProtKB: P09211 | |||||
PHAROS: P09211 GTEx: ENSG00000084207 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P09211 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 5 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GDS Query on GDS | D [auth A], J [auth B] | OXIDIZED GLUTATHIONE DISULFIDE C20 H32 N6 O12 S2 YPZRWBKMTBYPTK-BJDJZHNGSA-N |  | ||
| GSH Query on GSH | C [auth A], I [auth B] | GLUTATHIONE C10 H17 N3 O6 S RWSXRVCMGQZWBV-WDSKDSINSA-N |  | ||
| MES Query on MES | E [auth A], K [auth B] | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID C6 H13 N O4 S SXGZJKUKBWWHRA-UHFFFAOYSA-N |  | ||
| ACT Query on ACT | F [auth A], L [auth B] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M |  | ||
| CA Query on CA | G [auth A], H [auth A], M [auth B], N [auth B], O [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| SNC Query on SNC | A, B | L-PEPTIDE LINKING | C3 H6 N2 O3 S |  | CYS |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.55 Å
- R-Value Free: 0.181
- R-Value Work: 0.146
- R-Value Observed: 0.146
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 78.148 | α = 90 |
| b = 90.052 | β = 98.67 |
| c = 68.872 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| DENZO | data reduction |
| SCALEPACK | data scaling |
| PHENIX | phasing |
Entry History
Deposition Data
- Released Date: 2018-08-22 Deposition Author(s): Kumari, V., Ji, X.
Revision History (Full details and data files)
- Version 1.0: 2018-08-22
Type: Initial release - Version 1.1: 2023-10-04
Changes: Data collection, Database references, Derived calculations, Refinement description
