6CQ7 | pdb_00006cq7

The SH3 domain of MLK3 in complex with poly-proline peptide derived from Htt

PDB DOI: https://doi.org/10.2210/pdb6CQ7/pdb

Classification: TRANSFERASE
Organism(s): Homo sapiens
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2018-03-14 Released: 2018-09-19
Deposition Author(s): Kall, S.L., Lavie, A.
Funding Organization(s): National Institutes of Health/National Institute of Dental and Craniofacial Research (NIH/NIDCR), National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.00 Å
R-Value Free:
0.260 (Depositor), 0.265 (DCC)
R-Value Work:
0.196 (Depositor), 0.214 (DCC)
R-Value Observed:
0.200 (Depositor)

Starting Model: experimental
View more details

wwPDB Validation 3D Report Full Report

Validation slider image for 6CQ7

This is version 1.2 of the entry. See complete history.

Literature

The SH3 domain of MLK3 in complex with poly-proline peptide derived from Htt

Kall, S.L., Lavie, A.

To be published.

Macromolecule Content

Total Structure Weight: 8.43 kDa
Atom Count: 590
Modeled Residue Count: 73
Deposited Residue Count: 80
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Mitogen-activated protein kinase kinase kinase 11, Huntingtin fusion protein	A	80	Homo sapiens	Mutation(s): 0 Gene Names: MAP3K11, MLK3, PTK1, SPRK, HTT, HD, IT15 EC: 2.7.11.25
UniProt & NIH Common Fund Data Resources
Find proteins for Q16584 (Homo sapiens) Explore Q16584 Go to UniProtKB: Q16584
PHAROS: Q16584 GTEx: ENSG00000173327
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q16584
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.00 Å
R-Value Free: 0.260 (Depositor), 0.265 (DCC)
R-Value Work: 0.196 (Depositor), 0.214 (DCC)
R-Value Observed: 0.200 (Depositor)

Space Group: P 4₃ 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 59	α = 90
b = 59	β = 90
c = 84.36	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
XDS	data reduction
ARP/wARP	model building
MOLREP	phasing

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2018-09-19

Deposition Author(s):

Funding Organization	Location	Grant Number
National Institutes of Health/National Institute of Dental and Craniofacial Research (NIH/NIDCR)	United States	NIDCR DE018381
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)	United States	R01EB013685

Revision History (Full details and data files)

Version 1.0: 2018-09-19
Type: Initial release
Version 1.1: 2019-12-11
Changes: Author supporting evidence
Version 1.2: 2023-10-04
Changes: Data collection, Database references, Refinement description

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.