6WPK

SARM1 Autoinhibited Conformation

• PDB DOI: https://doi.org/10.2210/pdb6WPK/pdb
• EM Map EMD-21863: EMDB EMDataResource

• Classification: HYDROLASE
• Organism(s): Homo sapiens
• Expression System: Homo sapiens
• Mutation(s): No 


• Deposited: 2020-04-27 Released: 2020-08-12 
• Deposition Author(s): Xie, T., Bratkowski, M., Bai, X., Sambashivan, S.
• Funding Organization(s): Cancer Prevention and Research Institute of Texas (CPRIT), Welch Foundation, National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 3.30 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Structural and Mechanistic Regulation of the Prodegenerative NAD Hydrolase SARM1

Bratkowski, M., Xie, T., Thayer, D.A., Lad, S., Mathur, P., Yang, Y.S., Burdett, T.C., Danao, J., Cantor, A., Kozak, J.A., Brown, S.P., Bai, X., Sambashivan, S.

(2020) Cell Rep 32: 107999-107999

• DOI: https://doi.org/10.1016/j.celrep.2020.107999

Biological Assembly 1  

Global Symmetry: Cyclic - C8  (Explore in 3D)
Global Stoichiometry: Homo 8-mer - A8 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: gel filtration

Macromolecule Content

• Total Structure Weight: 605.44 kDa 
• Atom Count: 33,229 
• Modelled Residue Count: 4,376 
• Deposited Residue Count: 5,488 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
NAD(+) hydrolase SARM1	A, B, C, D, E, F, G, H	686	Homo sapiens	Mutation(s): 0  Gene Names: SARM1, KIAA0524, SAMD2, SARM EC: 3.2.2.6 (PDB Primary Data), 3.2.2 (PDB Primary Data)
UniProt & NIH Common Fund Data Resources
Find proteins for Q6SZW1 (Homo sapiens) Explore Q6SZW1  Go to UniProtKB:  Q6SZW1
PHAROS:  Q6SZW1 GTEx:  ENSG00000004139

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 3.30 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

EM Software:

Task	Software Package	Version
RECONSTRUCTION	RELION

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2020-08-12 
Deposition Author(s): Xie, T., Bratkowski, M., Bai, X., Sambashivan, S.

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Funding Organization	Location	Grant Number
Cancer Prevention and Research Institute of Texas (CPRIT)	United States	RR160082
Welch Foundation	United States	I-1944-20180324
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)	United States	R01136976

Revision History  

• Version 1.0: 2020-08-12
  Type: Initial release
  
• Version 1.1: 2024-03-06
  Changes: Data collection, Database references