7MPS

Brucella melitensis NrnC with engaged loop


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 0.166 
  • R-Value Work: 0.153 
  • R-Value Observed: 0.153 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Structural characterization of NrnC identifies unifying features of dinucleotidases

Lormand, J.D.Sondermann, H.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
NanoRNase CA, B, C, D206Brucella melitensisMutation(s): 0 
Gene Names: rnd_2CUC12_07925NCTC8223_00749
EC: 3.1.13.5
UniProt
Find proteins for A0A2X1C2S7 (Brucella melitensis)
Explore A0A2X1C2S7 
Go to UniProtKB:  A0A2X1C2S7
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
EPE
Query on EPE

Download Ideal Coordinates CCD File 
E [auth A], I [auth B], P [auth C], U [auth D]4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
C8 H18 N2 O4 S
JKMHFZQWWAIEOD-UHFFFAOYSA-N
 Ligand Interaction
SO4
Query on SO4

Download Ideal Coordinates CCD File 
F [auth A] , G [auth A] , H [auth A] , J [auth B] , K [auth B] , L [auth B] , M [auth C] , N [auth C] , 
F [auth A],  G [auth A],  H [auth A],  J [auth B],  K [auth B],  L [auth B],  M [auth C],  N [auth C],  O [auth C],  Q [auth D],  R [auth D],  S [auth D],  T [auth D]
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 0.166 
  • R-Value Work: 0.153 
  • R-Value Observed: 0.153 
  • Space Group: P 4
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 110.671α = 90
b = 110.671β = 90
c = 110.151γ = 90
Software Package:
Software NamePurpose
XDSdata reduction
Aimlessdata scaling
PHENIXrefinement
PDB_EXTRACTdata extraction
PHENIXphasing

Structure Validation

View Full Validation Report




Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)United StatesR01AI142400

Revision History  (Full details and data files)

  • Version 1.0: 2021-09-15
    Type: Initial release