7NQL

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.40 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Structural basis of translation termination, rescue, and recycling in mammalian mitochondria.

Kummer, E.Schubert, K.N.Schoenhut, T.Scaiola, A.Ban, N.

(2021) Mol Cell 81: 2566-2582.e6

  • DOI: https://doi.org/10.1016/j.molcel.2021.03.042
  • Primary Citation of Related Structures:  
    7NQH, 7NQL, 7NSH, 7NSI, 7NSJ

  • PubMed Abstract: 

    The mitochondrial translation system originates from a bacterial ancestor but has substantially diverged in the course of evolution. Here, we use single-particle cryo-electron microscopy (cryo-EM) as a screening tool to identify mitochondrial translation termination mechanisms and to describe them in molecular detail. We show how mitochondrial release factor 1a releases the nascent chain from the ribosome when it encounters the canonical stop codons UAA and UAG. Furthermore, we define how the peptidyl-tRNA hydrolase ICT1 acts as a rescue factor on mitoribosomes that have stalled on truncated messages to recover them for protein synthesis. Finally, we present structural models detailing the process of mitochondrial ribosome recycling to explain how a dedicated elongation factor, mitochondrial EFG2 (mtEFG2), has specialized for cooperation with the mitochondrial ribosome recycling factor to dissociate the mitoribosomal subunits at the end of the translation process.


  • Organizational Affiliation

    Swiss Federal Institute of Technology, Institute of Molecular Biology and Biophysics, Otto-Stern-Weg 5, 8093 Zurich, Switzerland. Electronic address: eva.kummer@cpr.ku.dk.


Macromolecules

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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L34A [auth B7]95Sus scrofaMutation(s): 0 
Gene Names: MRPL34
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UniProt GroupA0A4X1UFR4
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L35B [auth B8]188Sus scrofaMutation(s): 0 
Gene Names: MRPL35
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal proteinC [auth B9]100Sus scrofaMutation(s): 0 
Gene Names: MRPL36
UniProt
Find proteins for A0A287A731 (Sus scrofa)
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
uL2mF [auth BD]306Sus scrofaMutation(s): 0 
Gene Names: MRPL2
UniProt
Find proteins for F1RRN2 (Sus scrofa)
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
ICT1G [auth BE]399Sus scrofaMutation(s): 0 
Gene Names: MRPL3
UniProt
Find proteins for A0A140UHW4 (Sus scrofa)
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L4H [auth BF]294Sus scrofaMutation(s): 0 
Gene Names: MRPL4
UniProt
Find proteins for A0A287B9C4 (Sus scrofa)
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Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L9I [auth BI]268Sus scrofaMutation(s): 0 
Gene Names: MRPL9
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Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L10J [auth BJ]262Sus scrofaMutation(s): 0 
Gene Names: MRPL10
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Entity ID: 11
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L11K [auth BK]192Sus scrofaMutation(s): 0 
Gene Names: MRPL11
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Entity ID: 12
MoleculeChains Sequence LengthOrganismDetailsImage
Peptidyl-tRNA hydrolase ICT1, mitochondrialL [auth BL]184Homo sapiensMutation(s): 0 
Gene Names: MRPL58DS1ICT1
EC: 3.1.1.29
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PHAROS:  Q14197
GTEx:  ENSG00000167862 
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Entity ID: 13
MoleculeChains Sequence LengthOrganismDetailsImage
uL13mM [auth BN]178Sus scrofaMutation(s): 0 
Gene Names: MRPL13
UniProt
Find proteins for K7GP19 (Sus scrofa)
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Entity ID: 14
MoleculeChains Sequence LengthOrganismDetailsImage
uL14mN [auth BO]145Sus scrofaMutation(s): 0 
Gene Names: MRPL14
UniProt
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Entity ID: 15
MoleculeChains Sequence LengthOrganismDetailsImage
uL15mO [auth BP]296Sus scrofaMutation(s): 0 
Gene Names: MRPL15
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Entity ID: 16
MoleculeChains Sequence LengthOrganismDetailsImage
uL16mP [auth BQ]251Sus scrofaMutation(s): 0 
Gene Names: MRPL16
UniProt
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Entity ID: 17
MoleculeChains Sequence LengthOrganismDetailsImage
bL17mQ [auth BR]169Sus scrofaMutation(s): 0 
Gene Names: MRPL17
UniProt
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Entity ID: 18
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L18R [auth BS]180Sus scrofaMutation(s): 0 
Gene Names: MRPL18
UniProt
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Entity ID: 19
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L19S [auth BT]292Sus scrofaMutation(s): 0 
Gene Names: MRPL19
UniProt
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Entity ID: 20
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L20T [auth BU]149Sus scrofaMutation(s): 0 
Gene Names: MRPL20
UniProt
Find proteins for A0A286ZU56 (Sus scrofa)
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Entity ID: 21
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L21U [auth BV]209Sus scrofaMutation(s): 0 
Gene Names: MRPL21
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Entity ID: 22
MoleculeChains Sequence LengthOrganismDetailsImage
uL22mV [auth BW]210Sus scrofaMutation(s): 0 
Gene Names: MRPL22
UniProt
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Entity ID: 23
MoleculeChains Sequence LengthOrganismDetailsImage
uL23mW [auth BX]150Sus scrofaMutation(s): 0 
Gene Names: MRPL23
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Entity ID: 24
MoleculeChains Sequence LengthOrganismDetailsImage
uL24mX [auth BY]216Sus scrofaMutation(s): 0 
Gene Names: MRPL24
UniProt
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Entity ID: 25
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L37Y [auth Ba]423Sus scrofaMutation(s): 0 
Gene Names: MRPL37
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Entity ID: 26
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L38Z [auth Bb]380Sus scrofaMutation(s): 0 
Gene Names: MRPL38
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Entity ID: 27
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L39AA [auth Bc]334Sus scrofaMutation(s): 0 
Gene Names: MRPL39
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Entity ID: 28
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L40BA [auth Bd]206Sus scrofaMutation(s): 0 
Gene Names: MRPL40
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Entity ID: 29
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L41CA [auth Be]135Sus scrofaMutation(s): 0 
Gene Names: MRPL41
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Entity ID: 30
MoleculeChains Sequence LengthOrganismDetailsImage
mL42DA [auth Bf]142Sus scrofaMutation(s): 0 
Gene Names: MRPL42
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Entity ID: 31
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L43EA [auth Bg]159Sus scrofaMutation(s): 0 
Gene Names: MRPL43
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Entity ID: 32
MoleculeChains Sequence LengthOrganismDetailsImage
mL44FA [auth Bh]332Sus scrofaMutation(s): 0 
Gene Names: MRPL44
UniProt
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Entity ID: 33
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L45GA [auth Bi]306Sus scrofaMutation(s): 0 
Gene Names: MRPL45
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Entity ID: 34
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L46HA [auth Bj]279Sus scrofaMutation(s): 0 
Gene Names: MRPL46
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Entity ID: 35
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L48, mitochondrialIA [auth Bk]269Sus scrofaMutation(s): 0 
Gene Names: MRPL48
UniProt
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Entity ID: 36
MoleculeChains Sequence LengthOrganismDetailsImage
Mrpl34JA [auth Bl]166Sus scrofaMutation(s): 0 
Gene Names: MRPL49
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Entity ID: 37
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L50KA [auth Bm]198Sus scrofaMutation(s): 0 
Gene Names: MRPL50
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Entity ID: 38
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L51LA [auth Bn]128Sus scrofaMutation(s): 0 
Gene Names: MRPL51
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Entity ID: 39
MoleculeChains Sequence LengthOrganismDetailsImage
mL52MA [auth Bo]124Sus scrofaMutation(s): 0 
Gene Names: MRPL52
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Entity ID: 40
MoleculeChains Sequence LengthOrganismDetailsImage
mL53NA [auth Bp]112Sus scrofaMutation(s): 0 
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Entity ID: 41
MoleculeChains Sequence LengthOrganismDetailsImage
mL54OA [auth Bq]138Sus scrofaMutation(s): 0 
Gene Names: MRPL54
UniProt
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Entity ID: 42
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L57PA [auth Bt]102Sus scrofaMutation(s): 0 
Gene Names: MRPL57
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Entity ID: 43
MoleculeChains Sequence LengthOrganismDetailsImage
mL62 (ICT1)QA [auth Bu]205Sus scrofaMutation(s): 0 
Gene Names: MRPL58
EC: 3.1.1.29
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Entity ID: 44
MoleculeChains Sequence LengthOrganismDetailsImage
mL64RA [auth Bv]222Sus scrofaMutation(s): 0 
Gene Names: GADD45GIP1
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Entity ID: 45
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein S30, mitochondrialSA [auth Bw]433Sus scrofaMutation(s): 0 
Gene Names: MRPS30
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Entity ID: 46
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S18ATA [auth Bx]196Sus scrofaMutation(s): 0 
Gene Names: MRPS18A
UniProt
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Entity ID: 48
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L12198Sus scrofaMutation(s): 0 
Gene Names: MRPL12
UniProt
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Entity ID: 49
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S2YA [auth AB]289Sus scrofaMutation(s): 0 
Gene Names: MRPS2
UniProt
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Entity ID: 50
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S24ZA [auth AC]167Sus scrofaMutation(s): 0 
Gene Names: MRPS24
UniProt
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Entity ID: 51
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S5AB [auth AE]430Sus scrofaMutation(s): 0 
Gene Names: MRPS5
UniProt
Find proteins for F1SU66 (Sus scrofa)
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Entity ID: 52
MoleculeChains Sequence LengthOrganismDetailsImage
bS6mBB [auth AF]276Sus scrofaMutation(s): 0 
Gene Names: MRPS6
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Entity ID: 53
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S7CB [auth AG]242Sus scrofaMutation(s): 0 
Gene Names: MRPS7
UniProt
Find proteins for A0A286ZJ25 (Sus scrofa)
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Entity ID: 54
MoleculeChains Sequence LengthOrganismDetailsImage
uS9mDB [auth AI]397Sus scrofaMutation(s): 0 
Gene Names: MRPS9
UniProt
Find proteins for I3LU08 (Sus scrofa)
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Entity ID: 55
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S10EB [auth AJ]200Sus scrofaMutation(s): 0 
Gene Names: MRPS10
UniProt
Find proteins for F1RUU2 (Sus scrofa)
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Entity ID: 56
MoleculeChains Sequence LengthOrganismDetailsImage
uS11mFB [auth AK]196Sus scrofaMutation(s): 0 
Gene Names: MRPS11
UniProt
Find proteins for A0A286ZJJ6 (Sus scrofa)
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Entity ID: 57
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S12GB [auth AL]139Sus scrofaMutation(s): 0 
Gene Names: MRPS12
UniProt
Find proteins for A0A0M3KL52 (Sus scrofa)
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Entity ID: 58
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S14HB [auth AN]128Sus scrofaMutation(s): 0 
Gene Names: MRPS14
UniProt
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Entity ID: 59
MoleculeChains Sequence LengthOrganismDetailsImage
uS15mIB [auth AO]239Sus scrofaMutation(s): 0 
Gene Names: MRPS15
UniProt
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Entity ID: 60
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S16, mitochondrialJB [auth AP]135Sus scrofaMutation(s): 0 
Gene Names: MRPS16
UniProt
Find proteins for A0A480JTD7 (Sus scrofa)
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Entity ID: 61
MoleculeChains Sequence LengthOrganismDetailsImage
uS17mKB [auth AQ]130Sus scrofaMutation(s): 0 
Gene Names: MRPS17
UniProt
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Entity ID: 62
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S18CMB [auth AR]143Sus scrofaMutation(s): 0 
Gene Names: MRPS18C
UniProt
Find proteins for A0A0M3KL54 (Sus scrofa)
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Entity ID: 63
MoleculeChains Sequence LengthOrganismDetailsImage
bS21mNB [auth AU]87Sus scrofaMutation(s): 0 
Gene Names: MRPS21
UniProt
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Entity ID: 66
MoleculeChains Sequence LengthOrganismDetailsImage
unknownQB [auth AZ]18unidentifiedMutation(s): 0 
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Entity ID: 67
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S22RB [auth Aa]382Sus scrofaMutation(s): 0 
Gene Names: MRPS22
UniProt
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Entity ID: 68
MoleculeChains Sequence LengthOrganismDetailsImage
mS23SB [auth Ab]190Sus scrofaMutation(s): 0 
Gene Names: MRPS23
UniProt
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Entity ID: 69
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S25TB [auth Ac]173Sus scrofaMutation(s): 0 
Gene Names: MRPS25
UniProt
Find proteins for A0A0M3KL55 (Sus scrofa)
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Entity ID: 70
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S26UB [auth Ad]205Sus scrofaMutation(s): 0 
Gene Names: MRPS26
UniProt
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Entity ID: 71
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S27VB [auth Ae]455Sus scrofaMutation(s): 0 
Gene Names: MRPS27
UniProt
Find proteins for A0A5G2R5D6 (Sus scrofa)
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Entity ID: 72
MoleculeChains Sequence LengthOrganismDetailsImage
Mitoribosomal protein ms28, mrps28WB [auth Af]188Sus scrofaMutation(s): 0 
Gene Names: MRPS28
UniProt
Find proteins for A0A0M3KL56 (Sus scrofa)
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Entity ID: 73
MoleculeChains Sequence LengthOrganismDetailsImage
Death associated protein 3XB [auth Ag]410Sus scrofaMutation(s): 0 
Gene Names: DAP3
UniProt
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Entity ID: 74
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S31YB [auth Ah]387Sus scrofaMutation(s): 0 
Gene Names: MRPS31
UniProt
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Entity ID: 75
MoleculeChains Sequence LengthOrganismDetailsImage
mS33ZB [auth Ai]106Sus scrofaMutation(s): 0 
Gene Names: MRPS33
UniProt
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Entity ID: 76
MoleculeChains Sequence LengthOrganismDetailsImage
mS34AC [auth Aj]218Sus scrofaMutation(s): 0 
Gene Names: MRPS34
UniProt
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Entity ID: 77
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S35BC [auth Ak]325Sus scrofaMutation(s): 0 
Gene Names: MRPS35
UniProt
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Entity ID: 78
MoleculeChains Sequence LengthOrganismDetailsImage
mS37CC [auth Am]118Sus scrofaMutation(s): 0 
Gene Names: CHCHD1
UniProt
Find proteins for A0A4X1SZV4 (Sus scrofa)
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Entity ID: 79
MoleculeChains Sequence LengthOrganismDetailsImage
Aurora kinase A interacting protein 1DC [auth An]199Sus scrofaMutation(s): 0 
Gene Names: AURKAIP1
UniProt
Find proteins for A0A8D2A802 (Sus scrofa)
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Entity ID: 80
MoleculeChains Sequence LengthOrganismDetailsImage
Pentatricopeptide repeat domain 3EC [auth Ao]699Sus scrofaMutation(s): 0 
Gene Names: PTCD3
UniProt
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Entity ID: 81
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S18b, mitochondrialFC [auth Ap]258Sus scrofaMutation(s): 0 
Gene Names: MRPS18B
UniProt
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Entity ID: 82
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L27IC [auth B0]148Sus scrofaMutation(s): 0 
Gene Names: MRPL27
UniProt
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Entity ID: 83
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L28JC [auth B1]256Sus scrofaMutation(s): 0 
Gene Names: MRPL28
UniProt
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Entity ID: 84
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L47KC [auth B2]252Sus scrofaMutation(s): 0 
Gene Names: MRPL47
UniProt
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Entity ID: 85
MoleculeChains Sequence LengthOrganismDetailsImage
uL30mLC [auth B3]161Sus scrofaMutation(s): 0 
Gene Names: MRPL30
UniProt
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Entity ID: 86
MoleculeChains Sequence LengthOrganismDetailsImage
bL31mMC [auth B4]126Sus scrofaMutation(s): 0 
Gene Names: MRPL55
UniProt
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Entity ID: 87
MoleculeChains Sequence LengthOrganismDetailsImage
bL32mNC [auth B5]188Sus scrofaMutation(s): 0 
Gene Names: MRPL32
UniProt
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Entity ID: 88
MoleculeChains Sequence LengthOrganismDetailsImage
bL33mOC [auth B6]65Sus scrofaMutation(s): 0 
Gene Names: MRPL33
UniProt
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Entity ID: 4
MoleculeChains LengthOrganismImage
16S rRNAD [auth BA]1,571Sus scrofa
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Entity ID: 5
MoleculeChains LengthOrganismImage
CP tRNAPheE [auth BB]73Sus scrofa
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Entity ID: 47
MoleculeChains LengthOrganismImage
12S rRNAUA [auth AA]962Sus scrofa
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Entity ID: 64
MoleculeChains LengthOrganismImage
fMet-tRNAMet (P site)OB [auth AV]71Homo sapiens
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Entity ID: 65
MoleculeChains LengthOrganismImage
mRNAPB [auth AX]6Homo sapiens
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Small Molecules
Ligands 5 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
GTP
Query on GTP

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RP [auth Ag]GUANOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O14 P3
XKMLYUALXHKNFT-UUOKFMHZSA-N
5GP
Query on 5GP

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SK [auth BA],
TK [auth BA]
GUANOSINE-5'-MONOPHOSPHATE
C10 H14 N5 O8 P
RQFCJASXJCIDSX-UUOKFMHZSA-N
SPM
Query on SPM

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NL [auth AA],
UK [auth BA],
VK [auth BA]
SPERMINE
C10 H26 N4
PFNFFQXMRSDOHW-UHFFFAOYSA-N
ZN
Query on ZN

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ML [auth Bx]
NP [auth AR]
PC [auth B9]
QP [auth Ac]
VP [auth Ap]
ML [auth Bx],
NP [auth AR],
PC [auth B9],
QP [auth Ac],
VP [auth Ap],
XP [auth B5]
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
MG
Query on MG

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AD [auth BA]
AE [auth BA]
AF [auth BA]
AG [auth BA]
AH [auth BA]
AD [auth BA],
AE [auth BA],
AF [auth BA],
AG [auth BA],
AH [auth BA],
AI [auth BA],
AJ [auth BA],
AK [auth BA],
AL [auth BD],
AM [auth AA],
AN [auth AA],
AO [auth AA],
AP [auth AA],
BD [auth BA],
BE [auth BA],
BF [auth BA],
BG [auth BA],
BH [auth BA],
BI [auth BA],
BJ [auth BA],
BK [auth BA],
BL [auth BD],
BM [auth AA],
BN [auth AA],
BO [auth AA],
BP [auth AA],
CD [auth BA],
CE [auth BA],
CF [auth BA],
CG [auth BA],
CH [auth BA],
CI [auth BA],
CJ [auth BA],
CK [auth BA],
CL [auth BE],
CM [auth AA],
CN [auth AA],
CO [auth AA],
CP [auth AA],
DD [auth BA],
DE [auth BA],
DF [auth BA],
DG [auth BA],
DH [auth BA],
DI [auth BA],
DJ [auth BA],
DK [auth BA],
DL [auth BP],
DM [auth AA],
DN [auth AA],
DO [auth AA],
DP [auth AA],
ED [auth BA],
EE [auth BA],
EF [auth BA],
EG [auth BA],
EH [auth BA],
EI [auth BA],
EJ [auth BA],
EK [auth BA],
EL [auth BP],
EM [auth AA],
EN [auth AA],
EO [auth AA],
EP [auth AA],
FD [auth BA],
FE [auth BA],
FF [auth BA],
FG [auth BA],
FH [auth BA],
FI [auth BA],
FJ [auth BA],
FK [auth BA],
FL [auth BP],
FM [auth AA],
FN [auth AA],
FO [auth AA],
FP [auth AA],
GD [auth BA],
GE [auth BA],
GF [auth BA],
GG [auth BA],
GH [auth BA],
GI [auth BA],
GJ [auth BA],
GK [auth BA],
GL [auth BQ],
GM [auth AA],
GN [auth AA],
GO [auth AA],
GP [auth AA],
HD [auth BA],
HE [auth BA],
HF [auth BA],
HG [auth BA],
HH [auth BA],
HI [auth BA],
HJ [auth BA],
HK [auth BA],
HL [auth BR],
HM [auth AA],
HN [auth AA],
HO [auth AA],
HP [auth AA],
ID [auth BA],
IE [auth BA],
IF [auth BA],
IG [auth BA],
IH [auth BA],
II [auth BA],
IJ [auth BA],
IK [auth BA],
IL [auth Be],
IM [auth AA],
IN [auth AA],
IO [auth AA],
IP [auth AA],
JD [auth BA],
JE [auth BA],
JF [auth BA],
JG [auth BA],
JH [auth BA],
JI [auth BA],
JJ [auth BA],
JK [auth BA],
JL [auth Be],
JM [auth AA],
JN [auth AA],
JO [auth AA],
JP [auth AA],
KD [auth BA],
KE [auth BA],
KF [auth BA],
KG [auth BA],
KH [auth BA],
KI [auth BA],
KJ [auth BA],
KK [auth BA],
KL [auth Bl],
KM [auth AA],
KN [auth AA],
KO [auth AA],
KP [auth AA],
LD [auth BA],
LE [auth BA],
LF [auth BA],
LG [auth BA],
LH [auth BA],
LI [auth BA],
LJ [auth BA],
LK [auth BA],
LL [auth Bt],
LM [auth AA],
LN [auth AA],
LO [auth AA],
LP [auth AB],
MD [auth BA],
ME [auth BA],
MF [auth BA],
MG [auth BA],
MH [auth BA],
MI [auth BA],
MJ [auth BA],
MK [auth BA],
MM [auth AA],
MN [auth AA],
MO [auth AA],
MP [auth AL],
ND [auth BA],
NE [auth BA],
NF [auth BA],
NG [auth BA],
NH [auth BA],
NI [auth BA],
NJ [auth BA],
NK [auth BA],
NM [auth AA],
NN [auth AA],
NO [auth AA],
OD [auth BA],
OE [auth BA],
OF [auth BA],
OG [auth BA],
OH [auth BA],
OI [auth BA],
OJ [auth BA],
OK [auth BA],
OL [auth AA],
OM [auth AA],
ON [auth AA],
OO [auth AA],
OP [auth AV],
PD [auth BA],
PE [auth BA],
PF [auth BA],
PG [auth BA],
PH [auth BA],
PI [auth BA],
PJ [auth BA],
PK [auth BA],
PL [auth AA],
PM [auth AA],
PN [auth AA],
PO [auth AA],
PP [auth AX],
QC [auth BA],
QD [auth BA],
QE [auth BA],
QF [auth BA],
QG [auth BA],
QH [auth BA],
QI [auth BA],
QJ [auth BA],
QK [auth BA],
QL [auth AA],
QM [auth AA],
QN [auth AA],
QO [auth AA],
RC [auth BA],
RD [auth BA],
RE [auth BA],
RF [auth BA],
RG [auth BA],
RH [auth BA],
RI [auth BA],
RJ [auth BA],
RK [auth BA],
RL [auth AA],
RM [auth AA],
RN [auth AA],
RO [auth AA],
SC [auth BA],
SD [auth BA],
SE [auth BA],
SF [auth BA],
SG [auth BA],
SH [auth BA],
SI [auth BA],
SJ [auth BA],
SL [auth AA],
SM [auth AA],
SN [auth AA],
SO [auth AA],
SP [auth Ag],
TC [auth BA],
TD [auth BA],
TE [auth BA],
TF [auth BA],
TG [auth BA],
TH [auth BA],
TI [auth BA],
TJ [auth BA],
TL [auth AA],
TM [auth AA],
TN [auth AA],
TO [auth AA],
TP [auth Am],
UC [auth BA],
UD [auth BA],
UE [auth BA],
UF [auth BA],
UG [auth BA],
UH [auth BA],
UI [auth BA],
UJ [auth BA],
UL [auth AA],
UM [auth AA],
UN [auth AA],
UO [auth AA],
UP [auth An],
VC [auth BA],
VD [auth BA],
VE [auth BA],
VF [auth BA],
VG [auth BA],
VH [auth BA],
VI [auth BA],
VJ [auth BA],
VL [auth AA],
VM [auth AA],
VN [auth AA],
VO [auth AA],
WC [auth BA],
WD [auth BA],
WE [auth BA],
WF [auth BA],
WG [auth BA],
WH [auth BA],
WI [auth BA],
WJ [auth BA],
WK [auth BA],
WL [auth AA],
WM [auth AA],
WN [auth AA],
WO [auth AA],
WP [auth B3],
XC [auth BA],
XD [auth BA],
XE [auth BA],
XF [auth BA],
XG [auth BA],
XH [auth BA],
XI [auth BA],
XJ [auth BA],
XK [auth BA],
XL [auth AA],
XM [auth AA],
XN [auth AA],
XO [auth AA],
YC [auth BA],
YD [auth BA],
YE [auth BA],
YF [auth BA],
YG [auth BA],
YH [auth BA],
YI [auth BA],
YJ [auth BA],
YK [auth BB],
YL [auth AA],
YM [auth AA],
YN [auth AA],
YO [auth AA],
ZC [auth BA],
ZD [auth BA],
ZE [auth BA],
ZF [auth BA],
ZG [auth BA],
ZH [auth BA],
ZI [auth BA],
ZJ [auth BA],
ZK [auth BD],
ZL [auth AA],
ZM [auth AA],
ZN [auth AA],
ZO [auth AA]
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.40 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
European Molecular Biology Organization (EMBO)Switzerland--
Swiss National Science FoundationSwitzerland--

Revision History  (Full details and data files)

  • Version 1.0: 2021-05-05
    Type: Initial release
  • Version 1.1: 2021-12-15
    Changes: Database references