7R1D

Structure of MuvB complex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.50 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Structure of a nucleosome-bound MuvB transcription factor complex reveals DNA remodelling.

Koliopoulos, M.G.Muhammad, R.Roumeliotis, T.I.Beuron, F.Choudhary, J.S.Alfieri, C.

(2022) Nat Commun 13: 5075-5075

  • DOI: https://doi.org/10.1038/s41467-022-32798-9
  • Primary Citation of Related Structures:  
    7R1D

  • PubMed Abstract: 

    Genes encoding the core cell cycle machinery are transcriptionally regulated by the MuvB family of protein complexes in a cell cycle-specific manner. Complexes of MuvB with the transcription factors B-MYB and FOXM1 activate mitotic genes during cell proliferation. The mechanisms of transcriptional regulation by these complexes are still poorly characterised. Here, we combine biochemical analysis and in vitro reconstitution, with structural analysis by cryo-electron microscopy and cross-linking mass spectrometry, to functionally examine these complexes. We find that the MuvB:B-MYB complex binds and remodels nucleosomes, thereby exposing nucleosomal DNA. This remodelling activity is supported by B-MYB which directly binds the remodelled DNA. Given the remodelling activity on the nucleosome, we propose that the MuvB:B-MYB complex functions as a pioneer transcription factor complex. In this work, we rationalise prior biochemical and cellular studies and provide a molecular framework of interactions on a protein complex that is key for cell cycle regulation.


  • Organizational Affiliation

    Division of Structural Biology, Chester Beatty Laboratories, The Institute of Cancer Research, London, UK.


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Protein lin-9 homologA [auth C]542Homo sapiensMutation(s): 0 
Gene Names: LIN9BARATGS
UniProt & NIH Common Fund Data Resources
Find proteins for Q5TKA1 (Homo sapiens)
Explore Q5TKA1 
Go to UniProtKB:  Q5TKA1
PHAROS:  Q5TKA1
GTEx:  ENSG00000183814 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5TKA1
Sequence Annotations
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  • Reference Sequence
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Histone-binding protein RBBP4B [auth A]425Homo sapiensMutation(s): 0 
Gene Names: RBBP4RBAP48
UniProt & NIH Common Fund Data Resources
Find proteins for Q09028 (Homo sapiens)
Explore Q09028 
Go to UniProtKB:  Q09028
PHAROS:  Q09028
GTEx:  ENSG00000162521 
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UniProt GroupQ09028
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  • Reference Sequence
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Protein lin-37 homologC [auth B]255Homo sapiensMutation(s): 0 
Gene Names: LIN37MSTP064
UniProt & NIH Common Fund Data Resources
Find proteins for Q96GY3 (Homo sapiens)
Explore Q96GY3 
Go to UniProtKB:  Q96GY3
PHAROS:  Q96GY3
GTEx:  ENSG00000267796 
Entity Groups  
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UniProt GroupQ96GY3
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.50 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Wellcome TrustUnited Kingdom215458/Z/19

Revision History  (Full details and data files)

  • Version 1.0: 2022-08-10
    Type: Initial release
  • Version 1.1: 2022-09-14
    Changes: Database references