8CZD

Cryo-EM structure of BCL10 R58Q filament


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.60 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

BCL10 Mutations Define Distinct Dependencies Guiding Precision Therapy for DLBCL.

Xia, M.David, L.Teater, M.Gutierrez, J.Wang, X.Meydan, C.Lytle, A.Slack, G.W.Scott, D.W.Morin, R.D.Onder, O.Elenitoba-Johnson, K.S.J.Zamponi, N.Cerchietti, L.Lu, T.Philippar, U.Fontan, L.Wu, H.Melnick, A.M.

(2022) Cancer Discov 12: 1922-1941

  • DOI: https://doi.org/10.1158/2159-8290.CD-21-1566
  • Primary Citation of Related Structures:  
    8CZD, 8CZO

  • PubMed Abstract: 

    Activated B cell-like diffuse large B-cell lymphomas (ABC-DLBCL) have unfavorable outcomes and chronic activation of CARD11-BCL10-MALT1 (CBM) signal amplification complexes that form due to polymerization of BCL10 subunits, which is affected by recurrent somatic mutations in ABC-DLBCLs. Herein, we show that BCL10 mutants fall into at least two functionally distinct classes: missense mutations of the BCL10 CARD domain and truncation of its C-terminal tail. Truncating mutations abrogated a motif through which MALT1 inhibits BCL10 polymerization, trapping MALT1 in its activated filament-bound state. CARD missense mutations enhanced BCL10 filament formation, forming glutamine network structures that stabilize BCL10 filaments. Mutant forms of BCL10 were less dependent on upstream CARD11 activation and thus manifested resistance to BTK inhibitors, whereas BCL10 truncating but not CARD mutants were hypersensitive to MALT1 inhibitors. Therefore, BCL10 mutations are potential biomarkers for BTK inhibitor resistance in ABC-DLBCL, and further precision can be achieved by selecting therapy based on specific biochemical effects of distinct mutation classes.


  • Organizational Affiliation

    Division of Hematology/Oncology, Department of Medicine, Weill Cornell Medicine, New York, New York.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
B-cell lymphoma/leukemia 10106Homo sapiensMutation(s): 1 
Gene Names: BCL10CIPERCLAP
UniProt & NIH Common Fund Data Resources
Find proteins for O95999 (Homo sapiens)
Explore O95999 
Go to UniProtKB:  O95999
PHAROS:  O95999
GTEx:  ENSG00000142867 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupO95999
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.60 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONRELION3.1

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Not funded--

Revision History  (Full details and data files)

  • Version 1.0: 2022-06-22
    Type: Initial release
  • Version 1.1: 2022-06-29
    Changes: Database references
  • Version 1.2: 2022-08-17
    Changes: Database references
  • Version 1.3: 2024-02-14
    Changes: Data collection