8QLN

Crystal structure of an N-terminal fragment of HCMV UL47


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.51 Å
  • R-Value Free: 
    0.251 (Depositor), 0.243 (DCC) 
  • R-Value Work: 
    0.214 (Depositor), 0.209 (DCC) 
  • R-Value Observed: 
    0.216 (Depositor) 

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Ligand Structure Quality Assessment 

Created with Raphaël 2.3.0Worse 01 BetterLigand structure goodness of fit to experimental dataBest fitted TEWClick on this verticalbar to view details

This is version 1.0 of the entry. See complete history


Literature

Crystal structure of an N-terminal fragment of HCMV UL47

Rehfeld, C.L.Reubold, T.F.Eschenburg, S.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Inner tegument protein546Human herpesvirus 5 strain AD169Mutation(s): 7 
Gene Names: UL47
UniProt
Find proteins for P16784 (Human cytomegalovirus (strain AD169))
Explore P16784 
Go to UniProtKB:  P16784
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP16784
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
TEW
Query on TEW

Download Ideal Coordinates CCD File 
B [auth A]6-tungstotellurate(VI)
O24 Te W6
JDLYBIMRCSJRQJ-UHFFFAOYSA-M
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.51 Å
  • R-Value Free:  0.251 (Depositor), 0.243 (DCC) 
  • R-Value Work:  0.214 (Depositor), 0.209 (DCC) 
  • R-Value Observed: 0.216 (Depositor) 
Space Group: P 43 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 64.96α = 90
b = 64.96β = 90
c = 265.67γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
XSCALEdata scaling
CRANK2phasing

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment 

Created with Raphaël 2.3.0Worse 01 BetterLigand structure goodness of fit to experimental dataBest fitted TEWClick on this verticalbar to view details

Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
German Research Foundation (DFG)GermanyEXC 2155 RESIST Project ID 390874280

Revision History  (Full details and data files)

  • Version 1.0: 2024-10-02
    Type: Initial release