Copper center in artificial non-heme metalloenzyme
Morita, Y., Kubo, H., Matsumoto, R., Fujieda, N.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Cupin type-2 domain-containing protein | 118 | Thermotoga maritima MSB8 | Mutation(s): 4 Gene Names: TM_1459 | ||
UniProt | |||||
Find proteins for Q9X1H0 (Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)) Explore Q9X1H0 Go to UniProtKB: Q9X1H0 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9X1H0 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
P6G Query on P6G | C [auth A] | HEXAETHYLENE GLYCOL C12 H26 O7 IIRDTKBZINWQAW-UHFFFAOYSA-N | |||
CU Query on CU | D [auth A], E [auth A], F [auth B] | COPPER (II) ION Cu JPVYNHNXODAKFH-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
4GJ Query on 4GJ | A, B | L-PEPTIDE LINKING | C8 H10 N2 O2 S2 | CYS |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 50.57 | α = 90 |
b = 58.5 | β = 90 |
c = 71.96 | γ = 90 |
Software Name | Purpose |
---|---|
PHASER | phasing |
SHELXL-97 | refinement |
XDS | data reduction |
XDS | data scaling |
Funding Organization | Location | Grant Number |
---|---|---|
Japan Society for the Promotion of Science (JSPS) | Japan | 21KK0249 |
Japan Society for the Promotion of Science (JSPS) | Japan | 23K13764 |
Japan Society for the Promotion of Science (JSPS) | Japan | JP21H01954 |
Japan Society for the Promotion of Science (JSPS) | Japan | 24K01503 |