Bifunctional Inhibition of Neutrophil Elastase and Cathepsin-G by Eap4 from S. aureus
Mishra, N.B., Geisbrecht, B.V.To be published.
Experimental Data Snapshot
Starting Models: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Neutrophil elastase | A, B [auth D], F [auth G], J | 218 | Homo sapiens | Mutation(s): 0  EC: 3.4.21.37 | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P08246 (Homo sapiens) Explore P08246  Go to UniProtKB:  P08246 | |||||
PHAROS:  P08246 GTEx:  ENSG00000197561  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P08246 | ||||
Glycosylation | |||||
Glycosylation Sites: 2 | Go to GlyGen: P08246-1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Extracellular Adherence Protein | C, E [auth F], H [auth I], L | 108 | Staphylococcus aureus subsp. aureus Mu50 | Mutation(s): 0  Gene Names: map, SAV1938 | |
UniProt | |||||
Find proteins for Q99QS1 (Staphylococcus aureus (strain Mu50 / ATCC 700699)) Explore Q99QS1  Go to UniProtKB:  Q99QS1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q99QS1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cathepsin-G | D [auth E], G [auth H], I [auth B], K | 223 | Homo sapiens | Mutation(s): 0  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P08311 (Homo sapiens) Explore P08311  Go to UniProtKB:  P08311 | |||||
PHAROS:  P08311 GTEx:  ENSG00000100448  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P08311 | ||||
Glycosylation | |||||
Glycosylation Sites: 1 | Go to GlyGen: P08311-1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 4 | |||||
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Molecule | Chains | Length | 2D Diagram | Glycosylation | 3D Interactions |
beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | M, O, P, Q | 4 | N-Glycosylation | ||
Glycosylation Resources | |||||
GlyTouCan:  G32152BH GlyCosmos:  G32152BH GlyGen:  G32152BH |
Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG Query on NAG | U [auth E], V [auth H], W [auth B], X [auth K] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 82.207 | α = 82.77 |
b = 85.527 | β = 85.23 |
c = 89.536 | γ = 83.6 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
HKL-2000 | data scaling |
HKL-2000 | data reduction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | R35GM140852 |