9GSX | pdb_00009gsx

Campylobacter hook-filament junction-cap complex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 6.50 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

The structure of the complete extracellular bacterial flagellum reveals the mechanism of flagellin incorporation.

Einenkel, R.Qin, K.Schmidt, J.Al-Otaibi, N.S.Mann, D.Drobnic, T.Cohen, E.J.Gonzalez-Rodriguez, N.Harrowell, J.Shmakova, E.Beeby, M.Erhardt, M.Bergeron, J.R.C.

(2025) Nat Microbiol 10: 1741-1757

  • DOI: https://doi.org/10.1038/s41564-025-02037-0
  • Primary Citation of Related Structures:  
    9GNZ, 9GO6, 9GSX

  • PubMed Abstract: 

    The bacterial flagellum is essential for motility, adhesion and colonization in pathogens such as Salmonella enterica and Campylobacter jejuni. Its extracellular structure comprises the hook, hook-filament junction, filament and filament cap. Native structures of the hook-filament junction and the cap are lacking, and molecular mechanisms of cap-mediated filament assembly are largely uncharacterized. Here we use cryo-electron microscopy to resolve structures of the complete Salmonella extracellular flagellum including the pentameric FliD cap complex (3.7 Å) and the FlgKL hook-filament junction (2.9 Å), as well as the Campylobacter extracellular flagellum before filament assembly (6.5 Å). This, coupled with structure-guided mutagenesis and functional assays, reveals intermediates of filament assembly, showing that FliD cap protein terminal domain movement and clockwise rotation enable flagellin incorporation and stabilization of the filament. We show that the hook-filament junction acts as a buffer, preventing transfer of mechanical stress to the filament, and reveal the structural basis for the initiation of filament assembly. Collectively, this study provides comprehensive insights into flagellum assembly and how flagellin incorporation is coupled with its secretion.


  • Organizational Affiliation
    • Institute of Biology, Humboldt-Universität zu Berlin, Berlin, Germany.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Flagellin
A, B, C, D, E
A, B, C, D, E, F, G, H, I, J, K
750Campylobacter jejuniMutation(s): 0 
UniProt
Find proteins for A0A5T0WDM5 (Campylobacter jejuni)
Explore A0A5T0WDM5 
Go to UniProtKB:  A0A5T0WDM5
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A5T0WDM5
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Flagellar hook-associated protein 1
L, M, N, O, P
L, M, N, O, P, Q, R, S, T, U, V
608Campylobacter jejuniMutation(s): 0 
UniProt
Find proteins for Q0P8E9 (Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168))
Explore Q0P8E9 
Go to UniProtKB:  Q0P8E9
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ0P8E9
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Flagellar hook-associated protein 2AA [auth a],
W,
X,
Y,
Z
642Campylobacter jejuniMutation(s): 0 
UniProt
Find proteins for Q9PHW6 (Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168))
Explore Q9PHW6 
Go to UniProtKB:  Q9PHW6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9PHW6
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 6.50 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Medical Research Council (MRC, United Kingdom)United KingdomMR/V000799/1
Human Frontier Science Program (HFSP)FranceRGP0028/2021-HOCHBERG

Revision History  (Full details and data files)

  • Version 1.0: 2025-04-09
    Type: Initial release
  • Version 1.1: 2025-07-16
    Changes: Data collection, Database references