9SKF | pdb_00009skf

Model of M. pneumoniae 70S membrane complex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 8.60 Å
  • Aggregation State: CELL 
  • Reconstruction Method: SUBTOMOGRAM AVERAGING 

wwPDB Validation

Currently 9SKF does not have a validation slider image.


This is version 1.0 of the entry. See complete history

Literature

Visual proteomics of translational control in a minimal bacterium

Dobbs, J.M.Jensen, R.K.Mahamid, J.

To be published.

Macromolecule Content 

  • Total Structure Weight: 2,276.54 kDa 
  • Atom Count: 152,772 
  • Modeled Residue Count: 11,524 
  • Deposited Residue Count: 11,611 
  • Unique protein chains: 51
  • Unique nucleic acid chains: 4

Macromolecules


Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL34A [auth 0]47Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P78006 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P78006 
Go to UniProtKB:  P78006
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP78006
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
50S ribosomal protein L35B [auth 1]59Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75447 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75447 
Go to UniProtKB:  P75447
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75447
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 3
MoleculeChains  Sequence LengthOrganismDetailsImage
50S ribosomal protein L36C [auth 2]37Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P52864 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P52864 
Go to UniProtKB:  P52864
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP52864
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 8
MoleculeChains  Sequence LengthOrganismDetailsImage
SecDFH [auth 8]944Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75387 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75387 
Go to UniProtKB:  P75387
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75387
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 9
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS2I [auth A]240Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75560 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75560 
Go to UniProtKB:  P75560
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75560
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 10
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS3J [auth B]215Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P41205 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P41205 
Go to UniProtKB:  P41205
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP41205
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 11
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS4K [auth C]203Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P46775 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P46775 
Go to UniProtKB:  P46775
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP46775
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 12
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS5L [auth D]153Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for Q50301 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore Q50301 
Go to UniProtKB:  Q50301
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ50301
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 13
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein bS6M [auth E]167Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75543 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75543 
Go to UniProtKB:  P75543
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75543
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 14
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS7N [auth F]154Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75545 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75545 
Go to UniProtKB:  P75545
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75545
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 15
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS8O [auth G]141Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for Q50304 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore Q50304 
Go to UniProtKB:  Q50304
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ50304
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 16
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS9P [auth H]128Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75179 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75179 
Go to UniProtKB:  P75179
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75179
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 17
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS10Q [auth I]101Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75581 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75581 
Go to UniProtKB:  P75581
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75581
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 18
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS11R [auth J]114Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for Q50296 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore Q50296 
Go to UniProtKB:  Q50296
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ50296
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 19
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS12S [auth K]136Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75546 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75546 
Go to UniProtKB:  P75546
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75546
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 20
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS13T [auth L]118Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for Q50297 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore Q50297 
Go to UniProtKB:  Q50297
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ50297
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 21
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS14U [auth M]60Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for Q50305 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore Q50305 
Go to UniProtKB:  Q50305
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ50305
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 22
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS15V [auth N]83Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75173 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75173 
Go to UniProtKB:  P75173
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75173
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 23
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein bS16W [auth O]80Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75131 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75131 
Go to UniProtKB:  P75131
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75131
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 24
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS17X [auth P]83Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for Q50309 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore Q50309 
Go to UniProtKB:  Q50309
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ50309
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 25
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein bS18Y [auth Q]65Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75541 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75541 
Go to UniProtKB:  P75541
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75541
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 26
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein uS19Z [auth R]84Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75576 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75576 
Go to UniProtKB:  P75576
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75576
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 27
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein bS20AA [auth S]77Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75237 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75237 
Go to UniProtKB:  P75237
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75237
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 28
MoleculeChains  Sequence LengthOrganismDetailsImage
Small ribosomal subunit protein bS21BA [auth T]53Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P57079 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P57079 
Go to UniProtKB:  P57079
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP57079
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 29
MoleculeChains  Sequence LengthOrganismDetailsImage
50S ribosomal protein L10CA [auth U]161Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75240 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75240 
Go to UniProtKB:  P75240
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75240
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 30
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL12DA [auth V],
EA [auth W],
FA [auth X],
GA [auth Y]
29Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75239 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75239 
Go to UniProtKB:  P75239
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75239
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 31
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL2HA [auth a]285Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75577 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75577 
Go to UniProtKB:  P75577
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75577
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 32
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL3IA [auth b]229Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75580 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75580 
Go to UniProtKB:  P75580
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75580
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 33
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL4JA [auth c]210Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75579 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75579 
Go to UniProtKB:  P75579
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75579
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 34
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL5KA [auth d]175Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for Q50306 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore Q50306 
Go to UniProtKB:  Q50306
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ50306
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 35
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL6LA [auth e]176Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for Q50303 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore Q50303 
Go to UniProtKB:  Q50303
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ50303
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 36
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL9MA [auth f]145Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75540 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75540 
Go to UniProtKB:  P75540
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75540
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 37
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL11NA [auth h]128Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75550 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75550 
Go to UniProtKB:  P75550
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75550
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 38
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL13OA [auth i]144Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75178 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75178 
Go to UniProtKB:  P75178
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75178
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 39
MoleculeChains  Sequence LengthOrganismDetailsImage
50S ribosomal protein L14PA [auth j]122Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for Q50308 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore Q50308 
Go to UniProtKB:  Q50308
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ50308
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 40
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL15QA [auth k]148Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for Q50300 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore Q50300 
Go to UniProtKB:  Q50300
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ50300
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 41
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL16RA [auth l]136Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P41204 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P41204 
Go to UniProtKB:  P41204
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP41204
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 42
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL17SA [auth m]119Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for Q59547 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore Q59547 
Go to UniProtKB:  Q59547
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ59547
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 43
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL18TA [auth n]116Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for Q50302 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore Q50302 
Go to UniProtKB:  Q50302
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ50302
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 44
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL19UA [auth o]115Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75133 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75133 
Go to UniProtKB:  P75133
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75133
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 45
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL20VA [auth p]114Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P78023 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P78023 
Go to UniProtKB:  P78023
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP78023
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 46
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL21WA [auth q]99Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P78026 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P78026 
Go to UniProtKB:  P78026
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP78026
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 47
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL22XA [auth r]139Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75575 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75575 
Go to UniProtKB:  P75575
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75575
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 48
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL23YA [auth s]92Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75578 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75578 
Go to UniProtKB:  P75578
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75578
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 49
MoleculeChains  Sequence LengthOrganismDetailsImage
50S ribosomal protein L24ZA [auth t]111Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for Q50307 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore Q50307 
Go to UniProtKB:  Q50307
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ50307
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 50
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL27AB [auth u]86Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75458 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75458 
Go to UniProtKB:  P75458
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75458
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 51
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL28BB [auth v]63Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75171 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75171 
Go to UniProtKB:  P75171
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75171
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 52
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein uL29CB [auth w]108Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for Q50310 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore Q50310 
Go to UniProtKB:  Q50310
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ50310
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 53
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL31DB [auth x]44Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P78020 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P78020 
Go to UniProtKB:  P78020
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP78020
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 54
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL32EB [auth y]56Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P75238 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P75238 
Go to UniProtKB:  P75238
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP75238
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 55
MoleculeChains  Sequence LengthOrganismDetailsImage
Large ribosomal subunit protein bL33AFB [auth z]50Mycoplasmoides pneumoniae M129Mutation(s): 0 
UniProt
Find proteins for P78015 (Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1))
Explore P78015 
Go to UniProtKB:  P78015
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP78015
Sequence Annotations
Expand
Reference Sequence
Find similar nucleic acids by:  (by identity cutoff) 
Entity ID: 4
MoleculeChains LengthOrganismImage
23S ribosomal RNAD [auth 3]2,893Mycoplasmoides pneumoniae M129
Sequence Annotations
Expand
Reference Sequence
Find similar nucleic acids by:  (by identity cutoff) 
Entity ID: 5
MoleculeChains LengthOrganismImage
5S ribosomal RNAE [auth 4]108Mycoplasmoides pneumoniae M129
Sequence Annotations
Expand
Reference Sequence
Find similar nucleic acids by:  (by identity cutoff) 
Entity ID: 6
MoleculeChains LengthOrganismImage
16S ribosomal RNAF [auth 5]1,505Mycoplasmoides pneumoniae M129
Sequence Annotations
Expand
Reference Sequence
Find similar nucleic acids by:  (by identity cutoff) 
Entity ID: 7
MoleculeChains LengthOrganismImage
tRNA-PheG [auth 7]76Mycoplasmoides pneumoniae M129
Sequence Annotations
Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 8.60 Å
  • Aggregation State: CELL 
  • Reconstruction Method: SUBTOMOGRAM AVERAGING 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONM

Structure Validation

Currently 9SKF does not have a validation slider image.



Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Chan Zuckerberg InitiativeUnited States2021-234620
Independent Research Fund Denmark - Medical SciencesDenmark0106-00010A

Revision History  (Full details and data files)

  • Version 1.0: 2026-09-23
    Type: Initial release