9GO6 | pdb_00009go6

Salmonella hook-filament junction complex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.90 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

The structure of the complete extracellular bacterial flagellum reveals the mechanism of flagellin incorporation.

Einenkel, R.Qin, K.Schmidt, J.Al-Otaibi, N.S.Mann, D.Drobnic, T.Cohen, E.J.Gonzalez-Rodriguez, N.Harrowell, J.Shmakova, E.Beeby, M.Erhardt, M.Bergeron, J.R.C.

(2025) Nat Microbiol 10: 1741-1757

  • DOI: https://doi.org/10.1038/s41564-025-02037-0
  • Primary Citation of Related Structures:  
    9GNZ, 9GO6, 9GSX

  • PubMed Abstract: 

    The bacterial flagellum is essential for motility, adhesion and colonization in pathogens such as Salmonella enterica and Campylobacter jejuni. Its extracellular structure comprises the hook, hook-filament junction, filament and filament cap. Native structures of the hook-filament junction and the cap are lacking, and molecular mechanisms of cap-mediated filament assembly are largely uncharacterized. Here we use cryo-electron microscopy to resolve structures of the complete Salmonella extracellular flagellum including the pentameric FliD cap complex (3.7 Å) and the FlgKL hook-filament junction (2.9 Å), as well as the Campylobacter extracellular flagellum before filament assembly (6.5 Å). This, coupled with structure-guided mutagenesis and functional assays, reveals intermediates of filament assembly, showing that FliD cap protein terminal domain movement and clockwise rotation enable flagellin incorporation and stabilization of the filament. We show that the hook-filament junction acts as a buffer, preventing transfer of mechanical stress to the filament, and reveal the structural basis for the initiation of filament assembly. Collectively, this study provides comprehensive insights into flagellum assembly and how flagellin incorporation is coupled with its secretion.


  • Organizational Affiliation
    • Institute of Biology, Humboldt-Universität zu Berlin, Berlin, Germany.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Flagellar hook protein FlgE403Salmonella entericaMutation(s): 0 
UniProt
Find proteins for A0A663DET8 (Salmonella enterica)
Explore A0A663DET8 
Go to UniProtKB:  A0A663DET8
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UniProt GroupA0A663DET8
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  • Reference Sequence
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Flagellar hook-associated protein 1553Salmonella entericaMutation(s): 0 
UniProt
Find proteins for P0A1J6 (Salmonella typhi)
Explore P0A1J6 
Go to UniProtKB:  P0A1J6
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UniProt GroupP0A1J6
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  • Reference Sequence
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Flagellar hook-associated protein317Salmonella entericaMutation(s): 0 
UniProt
Find proteins for P16326 (Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720))
Explore P16326 
Go to UniProtKB:  P16326
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UniProt GroupP16326
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  • Reference Sequence
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
Flagellin495Salmonella entericaMutation(s): 0 
UniProt
Find proteins for P06179 (Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720))
Explore P06179 
Go to UniProtKB:  P06179
Entity Groups  
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UniProt GroupP06179
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.90 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Biotechnology and Biological Sciences Research Council (BBSRC)United KingdomBB/R009759/2
Human Frontier Science Program (HFSP)FranceRGY0080/2021

Revision History  (Full details and data files)

  • Version 1.0: 2025-04-09
    Type: Initial release
  • Version 1.1: 2025-07-16
    Changes: Data collection, Database references